Pairwise Alignments

Query, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 274 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (283), Expect = 5e-30
 Identities = 74/276 (26%), Positives = 152/276 (55%), Gaps = 15/276 (5%)

Query: 83  DNLSLWLNESLTVAITFAGVLFLLKIVDDIIVNYVVPIVEK------SENTLDDQLVPLM 136
           +NL  ++ ++  + +T+ G+  +  I+  II  Y+  + +K      ++  +D  +V  +
Sbjct: 2   ENLDKYIEQAPELILTY-GLQVVFAIIIFIIGKYLANVAKKLTTKLMNKRKIDKTVVSFV 60

Query: 137 RKLVKFLILIAGLMLILSNVGYNISALLAGLGIGGLAVALAAKDTIENLIAGFIIIVDRP 196
             +   L+ +  ++  L  +G   ++L+A +G  GLAV LA + ++ N  +G ++++ RP
Sbjct: 61  ANMAWALVFVFTVIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRP 120

Query: 197 FKLGDWIKWGGKEGIVEEVGIRSTRVRSFGDTLITVPNANIVQTEIENFSERRKRQVKAT 256
            ++GD+I+  G  G V+E+ I ST++R+  + +I  PN++I+   I N+S    R++   
Sbjct: 121 CRVGDYIEAAGIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSAMETRRIDLV 180

Query: 257 IGLTYDTPVEKVKRAKEIIENVL-NDHHGVVDP-IRVSFVEFGSFSLDLRVEYFVRDFGF 314
           IG++YD     +K+ KE+++ VL N+ + + DP   V+  E    S++  V  +V+  G 
Sbjct: 181 IGVSYDA---DLKQTKEVLKQVLDNNAYILKDPAYTVALTELADSSVNFVVRPWVK--GS 235

Query: 315 DFFLNTKDEINIKIKEEFEKENIEFAFPTQTVYYKK 350
           D++   + EI  +IK   ++ NI   +P   +Y K+
Sbjct: 236 DYW-PARFEILEQIKLALDENNIGIPYPQMDIYVKE 270