Pairwise Alignments

Query, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 388 a.a., MscS mechanosensitive ion channel from Marinobacter adhaerens HP15

 Score =  121 bits (304), Expect = 3e-32
 Identities = 92/330 (27%), Positives = 165/330 (50%), Gaps = 30/330 (9%)

Query: 22  IFFGVFFGKVMYIFLNKYVRVLAGKTKTKLDDVVLDAVEIPLIIVVFV-LFFKYGLNNLV 80
           I+ GVF G  +Y+ L   +R+  G+ +TK           PL I +   L +  GL  LV
Sbjct: 56  IYLGVFLG--VYLILIAAIRLGLGERRTKT----------PLYIQMRSGLRYLAGLGALV 103

Query: 81  LPDNLSLWLNESLTVAITFAGVLFLLKIVDDIIVNYVVPIVEKSENTLDDQLVPLMRKLV 140
           +       ++  +  A+  AG + L   V  ++   ++      E T   ++ P +R+LV
Sbjct: 104 VI-LAQFGVSPEVLKAMARAGFMVLGFYVVWVVFRRLI-----KEGTSRYRMDPSIRQLV 157

Query: 141 KFLILIAGLML----ILSNVGYNISALLAGLGIGGLAVALAAKDTIENLIAGFIIIVDRP 196
           + L  +    L    +L+  G+++ +++AGLGI G+AV  AA+ T+ N IAG  ++++RP
Sbjct: 158 ENLFAVIAATLAVVTVLAQFGFDVVSIIAGLGIVGIAVGFAAQSTLSNFIAGITLLIERP 217

Query: 197 FKLGDWIKWGGKEGIVEEVGIRSTRVRSFGDTLITVPNANIVQTEIENFSERRKRQVKAT 256
           F++GDW+   G+EG V ++ +R+T +R+  +    +PN ++  T+I N+S     ++   
Sbjct: 218 FRIGDWVTINGQEGKVVKIALRTTWLRTRDNIFTMIPNDSVASTDIINYSAEGVTRLNIP 277

Query: 257 IGLTYDTPVEKVKRAKEIIENVLNDHHGVVDPI----RVSFVEFGSFSLDLRVEYFVRDF 312
           +G+ Y    E  K A+E++  VL  H  V+       RV     G  S++L V+ ++   
Sbjct: 278 VGIAYK---ESAKAAREVLMPVLLAHPEVLQGAGMEPRVLLKSLGDSSVNLEVKVWITPD 334

Query: 313 GFDFFLNTKDEINIKIKEEFEKENIEFAFP 342
             D       +I  ++KE  +   IE  FP
Sbjct: 335 NLDVRPRIMADILEQMKEALDAAGIEIPFP 364