Pairwise Alignments

Query, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 293 a.a., small-conductance mechanosensitive channel MscS from Pantoea sp. MT58

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 13/210 (6%)

Query: 83  DNLSLWLNESLTVAITFA-------GVLFLLKIVDDIIVNYVVPIVEKSENTLDDQLVPL 135
           +N   W+  +  + I++A        ++F+  IV  II N V  ++      +D  +   
Sbjct: 11  NNAGNWIVRNQELLISYAVNIVAAIAIIFVGMIVARIISNTVNRLL--CARHIDTTVADF 68

Query: 136 MRKLVKFLILIAGLMLILSNVGYNISALLAGLGIGGLAVALAAKDTIENLIAGFIIIVDR 195
           +  LV++ I+   L+  L  +G   ++++A LG  GLAV LA KD++ NL AG ++++ R
Sbjct: 69  LSALVRYGIIAFTLIAALGRIGVQTTSVIAILGAAGLAVGLALKDSLSNLAAGVLLVIFR 128

Query: 196 PFKLGDWIKWGGKEGIVEEVGIRSTRVRSFGDTLITVPNANIVQTEIENFSERRKRQVKA 255
            F+ G+++  GG  G V  V I ST ++S     + VPN  I+   I NFS    R+ + 
Sbjct: 129 HFRTGEFVDLGGIMGTVMNVQIFSTTLKSADGKRVVVPNGKILAGNIVNFSREPVRRNEF 188

Query: 256 TIGLTYDTPVEKV----KRAKEIIENVLND 281
            IG++YD  V++V    +   E  E VL D
Sbjct: 189 IIGVSYDADVDQVLTLLREVVEADERVLKD 218