Pairwise Alignments

Query, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 278 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

 Score = 79.7 bits (195), Expect = 8e-20
 Identities = 64/256 (25%), Positives = 123/256 (48%), Gaps = 15/256 (5%)

Query: 100 AGVLFLLKI-VDDIIVNYVVPIVEKSENTLDDQLVPLMRKLVKFLILIAGLMLILSNVGY 158
           A ++FLL + V   +   V    EK +  +D  L   +  LV+ LI++   ++ L  +G 
Sbjct: 34  AALVFLLGLWVASKVSRLVAKQCEKHQ--IDITLSNFVSNLVRILIIVMVAIIALGKIGI 91

Query: 159 NISALLAGLGIGGLAVALAAKDTIENLIAGFIIIVDRPFKLGDWIKWGGKEGIVEEVGIR 218
           +++ ++A +G   L   LA +  + N  AG  IIV RPF +G+ I+  G+ G+V  + + 
Sbjct: 92  SVTPMVAAIGAASLGAGLALQGMLSNYAAGVTIIVTRPFVVGNTIEIKGESGVVTRINLG 151

Query: 219 STRVRSFGDTLITVPNANIVQTEIEN-FSERRKRQVKATIGLTYDTPVEKVKRAKEIIEN 277
            T + +     I++PN +IV   + N FS    + V+    L+Y+   E    A  +I  
Sbjct: 152 MTILTNEEGEQISIPNKHIVGEILHNSFS---NKLVETQFNLSYNNDPE---AAISLITE 205

Query: 278 VLNDHHGVVDPI--RVSFVEFGSFSLDLRVEYFVRDFGFDFFLNTKDEINIKIKEEFEKE 335
           +L+ +  V       +    F +  +++ V Y+V       +   K +IN+ I    ++ 
Sbjct: 206 LLSQNPNVSQDTTPNIGINGFNAIGIEIGVRYWVPT---QSYFQHKYKINLAIYNALKQA 262

Query: 336 NIEFAFPTQTVYYKKE 351
            IE A P + ++ +++
Sbjct: 263 GIEMACPVREIHLQEK 278