Pairwise Alignments

Query, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 551 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

 Score = 95.1 bits (235), Expect = 4e-24
 Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 8/251 (3%)

Query: 99  FAGVLFLLKIVDDIIVNYVVPIVEKSENTLDDQLVPLMRKLVKFLILIAGLMLILSNVGY 158
           F  +LF+  +   +    V   V  S+      L      L    +   G+++ LS +G 
Sbjct: 301 FCMILFVASLAGKLAKKIVSNTVSNSKLNFSKLLQDFFTSLSGKAVFTIGVLIALSQLGI 360

Query: 159 NISALLAGLGIGGLAVALAAKDTIENLIAGFIIIVDRPFKLGDWIKWGGKEGIVEEVGIR 218
            +  LLAG GI G+ +  A +D++ N  +G +I++ RP+ +GD I   G  G V  + + 
Sbjct: 361 ELGPLLAGFGIAGVIIGFALQDSLSNFASGMMILIYRPYDVGDLISAAGVTGRVSHMSLV 420

Query: 219 STRVRSFGDTLITVPNANIVQTEIENFSERRKRQVKATIGLTYDTPVEKVKRAKEIIENV 278
           ST +++  +  + +PN  I    I N +   +R+V  T G+ Y    + ++ A+ +++++
Sbjct: 421 STTIKTLDNQRLIIPNNKIWGDTINNITAEHQRRVDMTFGIGYG---DNIEHAEAVLKSI 477

Query: 279 LNDHHGV--VDPIRVSFVEFGSFSLDLRVEYFVRDFGFDFFLNTKDEINIKIKEEFEKEN 336
           +  H  V  +    +     G  S+D  V  + +    + + +   +I  ++K  F+ E 
Sbjct: 478 VEAHPKVQKIPAPLIKLHVLGESSVDFIVRPWAKP---EDYWDVYWDITREVKMRFDAEG 534

Query: 337 IEFAFPTQTVY 347
           I   FP + V+
Sbjct: 535 ISIPFPQRDVH 545