Pairwise Alignments

Query, 213 a.a., 50S ribosomal protein L1 from Methanococcus maripaludis S2

Subject, 235 a.a., ribosomal protein L1 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 63.5 bits (153), Expect = 3e-15
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 29/209 (13%)

Query: 17  AKPRNFTQSVDLIVNLKELDLSRPENRLKEQIVLPSGRGKDVAIAVIAKGDLAAQAEDMG 76
           A P  F ++VD+ + L  +D    +  ++  + +P+G GK V +AV  KG+  A+A+  G
Sbjct: 33  AAPAKFDETVDVAICLG-VDPKYSDQMVRGAVTMPNGLGKTVRVAVFCKGEKEAEAKAAG 91

Query: 77  LTVIRQEELEELGKNKKTAKKIANAHGFFIAQADMMPLVGKSLGPVLGPRGKMPQPVPAN 136
             V   EEL  + K K+       A    IA  D+M LVG+ +G VLGPRG MP      
Sbjct: 92  ADVAGAEEL--VAKIKEGWLDFDKA----IATPDVMALVGQ-IGRVLGPRGLMP------ 138

Query: 137 ANLAPLVARFQKTVAINTR---------DKA-LFQVYIGTESMSDDELAANAEAILNVVS 186
            N       F  T AI            DKA +    +G  S   +++  N +A+++ V+
Sbjct: 139 -NAKTGTVTFDITTAIKEMKAGRVEFKVDKAGVLHAPLGKVSFGSEKILGNLKALIDTVN 197

Query: 187 K---KYEKGLYHVKNAFTKLTMGAAAPIE 212
           +      KG Y    A +  TMG    ++
Sbjct: 198 RLKPSSAKGTYMQAMAIS-TTMGPGVKVD 225