Pairwise Alignments

Query, 213 a.a., 50S ribosomal protein L1 from Methanococcus maripaludis S2

Subject, 233 a.a., 50S ribosomal protein L1 (RefSeq) from Shewanella sp. ANA-3

 Score = 73.9 bits (180), Expect = 2e-18
 Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 20/217 (9%)

Query: 5   KILNAVKEARTLAKPRNFTQSVDLIVNLKELDLSRPENRLKEQIVLPSGRGKDVAIAVIA 64
           +I +AV   + LA  + F +SVD+ VNL  +D  + +  ++   VLP G G++V +AV  
Sbjct: 22  EINDAVALLKELATAK-FVESVDVAVNLG-IDPRKSDQNVRGATVLPHGTGREVRVAVFT 79

Query: 65  KGDLAAQAEDMGLTVIRQEELEELGKNKKTAKKIANAHGFFIAQADMMPLVGKSLGPVLG 124
           +G  A  A+  G  ++  ++L E  K  +    +       IA  D M +VG  LG +LG
Sbjct: 80  QGANAEAAKAAGAELVGMDDLAEQIKAGEMNFDVV------IASPDAMRVVG-MLGQILG 132

Query: 125 PRGKMPQPVPANANLAPLVARFQKT-----VAINTRDKALFQVYIGTESMSDDELAANAE 179
           PRG MP   P    + P VA   K      V        +    IG    +  +L  N E
Sbjct: 133 PRGLMPN--PKTGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFTPVQLKENLE 190

Query: 180 AILNVVSK---KYEKGLYHVKNAFTKLTMGAAAPIEK 213
           A+++ + K      KG+Y VK      TMGA   I++
Sbjct: 191 ALISALKKAKPAVAKGVY-VKKVSISTTMGAGVAIDQ 226