Pairwise Alignments

Query, 702 a.a., acetate--CoA ligase family protein from Methanococcus maripaludis S2

Subject, 797 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  117 bits (294), Expect = 2e-30
 Identities = 122/485 (25%), Positives = 220/485 (45%), Gaps = 50/485 (10%)

Query: 4   LEGIFNPKSVAVIGASEIEGKVGQSVMKNLLNFKQHGGKVYPINKKYNEVYGIKCYGSVL 63
           + G+ +P+ + +IG S+     G++++ N+L        V  ++   +EV G++C   + 
Sbjct: 303 IAGLVHPRRIGIIGVSDKRANFGRTILDNILAAGFPASDVVVVHPSCDEVAGVRCTPDLK 362

Query: 64  DVPETPDLVIISIPAEYA---VDAMEECGRKGVKAAIIITAGFAETNNHVLEDRLKAI-- 118
            +    DL ++++ AE     VD + E      +A ++I  G  E      E+R  A+  
Sbjct: 363 GMGRL-DLFVVAVGAEQVPAIVDGLVEDDL--AEAVLLIPGGLGEKAGS--EERAAAVRA 417

Query: 119 -IDQYGIRTIGP-----NCLGVINLHNHLNASF------SKEFSNMGNIAFISQSGA-IM 165
            ID+   +  GP     N LGV++     +  F       K     G  AFISQSGA ++
Sbjct: 418 RIDEAHAQGGGPVFLGGNSLGVLSRPGRFDTIFIPDAKLPKPQGQGGRSAFISQSGAFLV 477

Query: 166 TALLDIANYYNLGFSKIVSMGNKIDVQEYELLNYLENDPHTKVVALYIEGLKDEKFISAA 225
           T +  + ++ +  +  +VS+GN+ D+   +LL + ++ P   V+A+Y+EG  D+  +S  
Sbjct: 478 TRVSRLVDHIDPAY--LVSIGNQTDLTAGDLLTWFKDVPDLGVLAVYMEGFADDDGLSFC 535

Query: 226 KKISRK----KPVIVLKSGKSEEGAKAASSHTGSLAGNNAVYDAAFKKSRVFNVESFEDL 281
           + +       + V+  K+G++ EG  A + HT S+AG+  V  +  +++     ESF + 
Sbjct: 536 RAVRDAVACGRDVVFYKAGRTPEGKSATAGHTASVAGDYMVCTSCVRQAGALVAESFAEF 595

Query: 282 VNL--LKIFSVQPPMKSKKLAVITNAGGFGVLAADSV--EKCGLELADFSATTISELK-- 335
            +L  L +      ++  ++A ++ AG   V  ADS+  +   + LA  S  T  +L+  
Sbjct: 596 EDLYRLAVHFHGVTVRGDRIAAVSGAGFEAVGMADSISGDDFRVRLATLSPETARQLRDE 655

Query: 336 ---KYLPDTSGISNPLDLIGDADVNRYKHAFELVENDPNVDGLLAILT---------PQG 383
                L     + NPLD+   AD   +     L+  DP VD ++  +          P G
Sbjct: 656 LAAHRLDRLVDVRNPLDINPAADDALHARTVSLLAADPGVDAVVVGVVPLSPAMQTLPAG 715

Query: 384 MT--DALGVARELVKLKNYMICKKDKIPIVASFVGGTSVLEARSYLQEKGIPSFICPELA 441
           M   D+L     +  L    +    K P++A   GG         L+  G+  F   + A
Sbjct: 716 MRDGDSLDAPGSIATLLPETVRGLAK-PVIAVVDGGALYDPLVERLEAGGVLVFRSCDRA 774

Query: 442 VHALA 446
           V ALA
Sbjct: 775 VAALA 779



 Score = 37.4 bits (85), Expect = 3e-06
 Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 39/125 (31%)

Query: 526 KVVMKVVSADILHKSDAGCV-IID----------------------------PSDASEAF 556
           KVVMK+VS  ILHK+D G V IID                            P  A  A+
Sbjct: 66  KVVMKIVSPTILHKTDVGGVKIIDKHPGKIRSTWRRMLDEVPERFAAWLEHHPGGAPAAY 125

Query: 557 ETIMKNGEKYLFDRKIDGIIDGVLIEQFVT------GKEIIIGAKRDPVFGPVVMTGLGG 610
             +  +  +    R     + GVL+ QF+       G E+++  +R   FG V+  GLGG
Sbjct: 126 TGLTGDPLREAVARD----VRGVLMCQFMPPDSSAFGNELLMSLRRTREFGMVITAGLGG 181

Query: 611 IFVEV 615
              E+
Sbjct: 182 TDTEL 186