Pairwise Alignments

Query, 132 a.a., class III signal peptide-containing protein from Methanococcus maripaludis S2

Subject, 138 a.a., class III signal peptide-containing protein from Methanococcus maripaludis JJ

 Score =  174 bits (441), Expect = 4e-49
 Identities = 95/137 (69%), Positives = 112/137 (81%), Gaps = 6/137 (4%)

Query: 1   MSKGQVSVEFIVLFLALLVAVVVSTMTPGIFGLNKSVELSSASLAHAALSKVKSNIEILS 60
           MSKGQVSVEFIVLFLALLVAVVVSTMTPGIFGLNKSVELSSASLAHAALSKVKS++E+LS
Sbjct: 1   MSKGQVSVEFIVLFLALLVAVVVSTMTPGIFGLNKSVELSSASLAHAALSKVKSSVELLS 60

Query: 61  VSGEGSYKLVYVKSPPANWTFENRTIRVYGNGFNISTNTSVDL------NTYNYLASSLK 114
           VS  GS K+VYVKSP + W   NR+I + G+G+NISTNT+V L       ++ +  +SLK
Sbjct: 61  VSDPGSSKMVYVKSPISKWEINNRSISISGDGYNISTNTTVTLKNKLGSTSFTHETTSLK 120

Query: 115 ILSVNLTRNDKNVTVAI 131
           IL+VNLTR D+ V + I
Sbjct: 121 ILTVNLTRMDEYVQIDI 137