Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 241 a.a., amino acid ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  286 bits (731), Expect = 3e-82
 Identities = 140/240 (58%), Positives = 182/240 (75%)

Query: 1   LIEMVNIHKKFKEAHVLKGVDLKVAKGEVLVIVGPSGSGKSTLLRCINGLEKTTEGHIFF 60
           +I + N+HK + +  VLKG++  + +GEV+ ++GPSGSGKST LRCIN LE  T+G I  
Sbjct: 1   MINITNLHKSYGDNAVLKGINEHIRQGEVVSVIGPSGSGKSTFLRCINLLENPTQGDIEI 60

Query: 61  EGDDITDKKVNINKIRQKIGMVFQQFNLFPHLTVLDNITFAPRKVLNVSKKEAEELAREL 120
           EG  IT K   ++K+RQK+GMVFQ FNLFPH TVL NIT AP  +  +++ EA+  A  L
Sbjct: 61  EGQSITAKDACVDKLRQKVGMVFQNFNLFPHKTVLQNITLAPVSLKLMTQAEADNKALAL 120

Query: 121 LKKVGLEGKENQYPIQLSGGQQQRVAIARALAMKPDAMLFDEPTSALDPELVKEVLDVMK 180
           L +VGL+ K N YP  LSGGQ+QRVAIARALAM+PD MLFDEPTSALDPE+V +VLDVMK
Sbjct: 121 LTQVGLQDKANAYPSSLSGGQKQRVAIARALAMEPDLMLFDEPTSALDPEMVGDVLDVMK 180

Query: 181 QLAYEGMTMVVVTHEMGFAKEVGDRLIFIDDGQILEDGNPSDVFSNPKNERTKNFFGKIL 240
            LA +GMTMV+VTHEMGFA++V DR+IF+D G ++E   P ++F+ PK  RT++F  K+L
Sbjct: 181 DLAQKGMTMVIVTHEMGFARDVSDRVIFMDGGYVVESNIPEELFTRPKEARTQSFLSKVL 240