Pairwise Alignments

Query, 492 a.a., sodium/proline symporter PutP from Methanococcus maripaludis S2

Subject, 483 a.a., sodium/proline symporter (RefSeq) from Shewanella loihica PV-4

 Score =  477 bits (1228), Expect = e-139
 Identities = 239/483 (49%), Positives = 335/483 (69%), Gaps = 11/483 (2%)

Query: 6   LSIVLVFILYLLVVMGVGMYFYRRNETISDYVLGGRKLNSWVAALSAQASDMSGWLLMGL 65
           L I++ F  YL+++MG+G++ Y+  +++ DY+LGGR +   V ALS  ASDMSGWLL+GL
Sbjct: 5   LPILVTFFGYLILMMGIGLWAYKATDSVDDYILGGRSMGPAVTALSVGASDMSGWLLLGL 64

Query: 66  PGVAYLSGMSEIWIGVGLAIGTYLNWKFVAERLRRYTEIAKDSITIPVYLENRFRDQSKL 125
           PG  YL G+ E WIG+GL  G +LNW FVA+RLR YT+   +++T+P + E RF D+  +
Sbjct: 65  PGAVYLGGLGEAWIGIGLVFGAWLNWLFVAKRLRIYTQFTDNALTLPDFFEKRFEDKQSV 124

Query: 126 LRIVSAFFIMLFFLLYTSSGLVAGGKLFNLVFGVDYTLAVTIGALVIIGYTFLGGFLAVS 185
           L++VSA  I++FF  YTSSG+V G  LF  VFG+DY LA+ IG+ +I+ YTF+GGF AVS
Sbjct: 125 LKLVSAVTILVFFTFYTSSGMVGGAILFEKVFGLDYNLALLIGSGIIVAYTFVGGFFAVS 184

Query: 186 WTDFIQGSLMFIAIFLIPIMGISQVGGIDATMNAWNSISPDYLNPFTNLDGESLGIMGLA 245
           WTDF QG LM IA+ ++P+   SQ      T N  +S+ P  L    +L  ++  ++GLA
Sbjct: 185 WTDFFQGCLMLIALLIVPVTIFSQ----PETQNGIHSLDPAML----SLLSDNTTMIGLA 236

Query: 246 SALAWGLGYFGMPHILVRFMAIKSADKVPKARKIATTWVVISLFMAVLVGMVGAVALG-A 304
           S LAWGLGYFG PHIL RFMAI SAD +  +R+IA +W++++L  A+  G+ G +     
Sbjct: 237 SLLAWGLGYFGQPHILSRFMAIGSADDLKVSRRIAMSWMIVALMGALATGLAGTLYFADQ 296

Query: 305 PLDDPEHVFMAMAQGLFPSLIAGLFLAGVLAAIMSTADSQLLVTASAITEDIY-ALLNKN 363
           P+D+PE +F+ +A   F   I GL +A +L+AIMST DSQLLV +S ITED Y   L  +
Sbjct: 297 PIDNPETIFIHLAHAAFNPWIGGLLVAAILSAIMSTIDSQLLVCSSVITEDFYKKWLRPD 356

Query: 364 ASQKELLWISRFAVIVVAAIAYYFAIVPGSSVMGLVSYAWAGFGGAFGPVILLSLYWKRM 423
           AS KEL+ I R  V+ +A I+   A+ P SSV+ LVSYAWAGFG AFGPV++LSL+W+  
Sbjct: 357 ASSKELMMIGRIGVLTIAVISGVIALNPESSVLSLVSYAWAGFGAAFGPVVILSLFWRGY 416

Query: 424 TRNGALAGLLSGGFMVILWKNLSGGIFDLYEIVPAFLLASVMITVVSLMDKEPSLEIQEE 483
           +RNGA+A ++ G   V+LWK  +GGIFDLYEI+P FL A++   +VSL+   P+   +E+
Sbjct: 417 SRNGAVATIIVGAITVVLWKQSTGGIFDLYEILPGFLFATLAGVLVSLV-SAPADSTREQ 475

Query: 484 FDR 486
           F++
Sbjct: 476 FEQ 478