Pairwise Alignments

Query, 492 a.a., sodium/proline symporter PutP from Methanococcus maripaludis S2

Subject, 246 a.a., hypothetical sodium/proline symporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  174 bits (442), Expect = 2e-48
 Identities = 101/224 (45%), Positives = 135/224 (60%), Gaps = 15/224 (6%)

Query: 184 VSWTDFIQGSLMFIAIFLIPIMGISQV---GGIDATMNAWNSISPDYLNPFTNLDGESLG 240
           +SWTDF Q SLM IA+ +IP    S+     GI+       SI P  L     L  +   
Sbjct: 1   MSWTDFFQASLMLIALLIIPFAVFSRPESHAGIE-------SIDPAMLA----LISDKTT 49

Query: 241 IMGLASALAWGLGYFGMPHILVRFMAIKSADKVPKARKIATTWVVISLFMAVLVGMVGAV 300
           ++GL S LAWGLGYFG PHIL RFMAI + D +P +R+IA +W+++SL  A+  G+ G+V
Sbjct: 50  MIGLLSLLAWGLGYFGQPHILSRFMAIGTVDALPTSRRIAMSWMILSLLGALATGLAGSV 109

Query: 301 ALG-APLDDPEHVFMAMAQGLFPSLIAGLFLAGVLAAIMSTADSQLLVTASAITEDIYAL 359
                PL + E VF  +AQ  F   I GL +A +L+AIMST DSQLLV +S ITED Y  
Sbjct: 110 YFANEPLANAETVFFHLAQAAFNPWIGGLLIAAILSAIMSTIDSQLLVCSSVITEDFYRK 169

Query: 360 LNKNASQKELLWISRFAVIVVAAIAYYFAIVPGSSVMGLVSYAW 403
             +    +EL+ + R  V+ +A IA   A+ P +SV+ LVSYAW
Sbjct: 170 WLRPTDDRELMMVGRMGVLAIAVIAGIIALNPENSVLNLVSYAW 213