Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 462 a.a., sodium-solute symporter, putative from Pseudomonas fluorescens FW300-N2E2

 Score =  107 bits (266), Expect = 1e-27
 Identities = 109/470 (23%), Positives = 207/470 (44%), Gaps = 49/470 (10%)

Query: 2   IIGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPTM 61
           +I +     +R K   D+L+ GRN+ P     +           IG   ++G+ +GI   
Sbjct: 15  MIALGWYGMRRAKTRDDYLVAGRNLGPGFYLGTMAATVLGGASTIGTV-RLGYVYGISGF 73

Query: 62  WI--VVGNTIIGS--FLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTAFIIF 117
           W+   +G  I+G   FLA  +L  K   +TQ          LE+RY     ++    ++ 
Sbjct: 74  WLCGAIGLGIVGLSLFLAKPLLKLKIYTVTQ---------VLERRYNPAARQASALIMLV 124

Query: 118 FFLVPYSASIYKGLNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMV 177
           + L+  + S       +   FG+    + ++   +  +Y   GG  + TL D VQ  IM 
Sbjct: 125 YALMIGATSTIAIGTVMQVLFGLPFWVSILVGGGVVVLYSTIGGMWSLTLTDIVQFLIMT 184

Query: 178 IGVLLMVFFLGSNPEVGGFSGMLSNLSSIDPMLVTPINEASFIPIMGLALLT-----SIG 232
           +G++ ++  + S  + GG+  M++ L         P N   F  I G  +LT       G
Sbjct: 185 VGLVFLLMPM-SIVDAGGWDAMVAAL---------PANYFDFTAIGGDTILTYFLIYFFG 234

Query: 233 SWGLPQMIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGL 292
            +    +  + +T +SE  A  A   +  +  +     A IG  +++  PD        L
Sbjct: 235 IFIGQDIWQRVFTARSEGVAKVAGTAAGLYCVLYGLAGALIGMAAKVLLPD--------L 286

Query: 293 TSPDMIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLS 352
            + +     I++ +LP+ +  L++   ++A MST A+ +LA+S+ V  D +    +   S
Sbjct: 287 ENVNNAFASIVQTSLPNGIRGLVIAAALAALMSTAAAGLLAASTTVVQDLLPRLRQGRES 346

Query: 353 DKNTMILMRLLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTK 412
               +   R+  +L   +  ++A+V  S V+S + L++ L+ G +L P    +YWKR T 
Sbjct: 347 GSGDVHENRIATLLMGAVVLVIALVV-SDVISALTLAYNLLVGGMLIPLIGAIYWKRATT 405

Query: 413 EGVWAGITSALAIMLGGAYYFGINSVYMPAVGSLAMIAPIFVVMAVSLIT 462
               AG  +++++    A +F +          L    PI+  ++V+L++
Sbjct: 406 ----AGAITSMSLGFLTALFFMLKD-------GLDANTPIYYSLSVALVS 444