Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 494 a.a., L-proline:Na+ symporter (from data) from Pseudomonas stutzeri RCH2

 Score =  173 bits (438), Expect = 1e-47
 Identities = 126/480 (26%), Positives = 228/480 (47%), Gaps = 15/480 (3%)

Query: 2   IIGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPTM 61
           +I I  V  +  K   D++LGGR++  +++A S G +  S  + +G  G + +  G+   
Sbjct: 18  MILIGFVAYRATKNFDDYILGGRSLGSFVTALSAGASDMSGWLLMGLPGAI-FVAGLSES 76

Query: 62  WIVVGNTIIGSFLAWQVLGKKTREMTQRL-GASTMPSFLEKRYK--SKNLESLTAFIIFF 118
           WI +G  I+G++L W  +  + R  T+    A T+P +   R++  S+ L   +A +I  
Sbjct: 77  WIAIG-LIVGAWLNWLFVAGRLRVHTEHNHNALTLPDYFSHRFEDESRMLRIFSALVILV 135

Query: 119 FLVPYSAS-IYKGLNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMV 177
           F   Y AS +  G       FG+    A  + AA T +Y++ GGF+A +  D VQ  +M+
Sbjct: 136 FFTIYCASGVVAGARLFESSFGVPYEYALWIGAAATILYVFIGGFLAVSWTDTVQATLMI 195

Query: 178 IGVLLMVFFLGSNPEVGGFSGMLSNLSSIDPMLVTPINEASFIPIMGLALLTSIGSWGLP 237
             +L+   F+     +G     +  +++ +P      +  SF+ I+ L L   +G +G P
Sbjct: 196 FALLITPVFVIL--ALGDMGAAMDTIATQNPAAFDMFSGLSFVAIISL-LAWGLGYFGQP 252

Query: 238 QMIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGLTSPDM 297
            ++ +F    S K   +A+ +  A+  +   GA  +G     ++     +A A   + + 
Sbjct: 253 HILVRFMAADSIKTIPNARRIGMAWMILTLAGAVAVGFFGIAYFAGHPEQAGAVSQNGER 312

Query: 298 IVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSDKNTM 357
           +  ++++I    WVA +IL  V++A MSTL++ +L SSS ++ DF K  L+   S    +
Sbjct: 313 VFMELVKILFNPWVAGIILSGVLAAVMSTLSAQLLVSSSALTQDFYKAMLRKSASQTELV 372

Query: 358 ILMRLLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTKEGVWA 417
            + R + +L  +++  +A  P S VL L++ +W            + L WKR T+ G  A
Sbjct: 373 WVGRGMVLLIALIAIGIASNPESKVLGLVSYAWAGFGAAFGPVVLISLLWKRMTRNGALA 432

Query: 418 GITSALAIMLGGAYYFGINSVYMPAVGSLAMIAPIFVVMAVSL-----ITKPFEREHIDY 472
           G+      ++    + G+  +Y    G +     IFVV  +       I K FE    DY
Sbjct: 433 GMLVGAVTVVVWKEFIGL-GLYEIIPGFILASIAIFVVSKMGAEPAPSIIKRFEEADADY 491