Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 551 a.a., transporter, SSS family from Pseudomonas stutzeri RCH2

 Score = 95.9 bits (237), Expect = 3e-24
 Identities = 94/440 (21%), Positives = 184/440 (41%), Gaps = 45/440 (10%)

Query: 3   IGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPTMW 62
           +GI     KR    +D+   G ++  + +  +    + SA  F+G +  +  S     ++
Sbjct: 48  MGITKWAAKRNTSTADYYTAGGSITGFQNGLAIAGDFMSAASFLGISALVYTSGYDGLIY 107

Query: 63  IVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTAF----IIFF 118
                  IG  + W ++     E  + LG  T       R     +  L+AF    ++ F
Sbjct: 108 S------IGFLVGWPIILFLMAERLRNLGKFTFSDVASYRLGQTQIRLLSAFGSLIVVAF 161

Query: 119 FLVPYSASIYKGLNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMVI 178
           +L+       K +  LF   G+    A +L+  L  +Y+ FGG +A T    ++  +++ 
Sbjct: 162 YLIAQMVGAGKLIQLLF---GLDYYVAVVLVGVLMVMYVLFGGMLATTWVQIIKAVLLLS 218

Query: 179 GVLLMVFFLGSNPEVGGFSGML-----------SNLSSIDPMLVTPINEASFIPIMGLAL 227
           G   M   +  +  VG   G L           + + S   ++  PI+  S    +GLAL
Sbjct: 219 GASFMAIMVMKS--VGFDFGSLFAEAVKIHEKGAQIMSPGGLVSDPISAIS----LGLAL 272

Query: 228 LTSIGSWGLPQMIHKFYTIKSEKAAVSAKWVSTAF-------AFIITFGAAYIGTVSRLF 280
           +   G+ GLP ++ +F+T+   K A  + + +T F        FII FGA  + + +   
Sbjct: 273 M--FGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGAILLVSTN--- 327

Query: 281 YPDAASKAAAGLTSPDMIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSI 340
            P+      A +   +M+   +      +     I  +  +  ++ +A L LA +S VS 
Sbjct: 328 -PEFKDVTGAIVGGTNMVAIHLASAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSH 386

Query: 341 DFVKGRLKTDLS-DKNTMILMRLLCVLFVVLSFILAIV-PNSYVLSLMALSWGLVSGCLL 398
           D     +K   + +++ M + +L  +   V++ +L I+     +  ++ L++ + + C  
Sbjct: 387 DLYACVIKQGKAREEDEMRVTKLTTLTLGVVAILLGIIFEKQNIAFMVGLAFSIAASCNF 446

Query: 399 APYFLGLYWKRTTKEGVWAG 418
              FL +YWK  +  G   G
Sbjct: 447 PVLFLSMYWKGLSTRGALFG 466