Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 496 a.a., sodium/proline symporter PutP from Vibrio cholerae E7946 ATCC 55056

 Score =  194 bits (493), Expect = 6e-54
 Identities = 135/486 (27%), Positives = 244/486 (50%), Gaps = 21/486 (4%)

Query: 1   MIIGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPT 60
           +++ I     +R K  +D+ LGGR++ PW +A S G +  S  + +G  G   ++ GI +
Sbjct: 17  LMLAIGVYAYQRTKNSADYFLGGRSLGPWPAALSAGASDMSGWLLLGLPG-YAYAAGIES 75

Query: 61  MWIVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYK--SKNLESLTAFIIFF 118
            W+  G  ++G++  W V  K+ R  +    + T+P FL +R+   SK +++++AF I  
Sbjct: 76  FWLA-GGLLVGTWANWLVNAKRLRTYSITTDSLTLPEFLSRRFNDNSKLIQTISAFFILL 134

Query: 119 FLVPYSASIYKGLNFLFEG-FGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMV 177
           F + Y++S       LFE  FG+    A I+       Y  FGGF+A +  D VQG +M 
Sbjct: 135 FFLFYTSSGLVAGGKLFETVFGLDYSTAVIIGTVCVVSYTLFGGFLAVSWTDLVQGLLMA 194

Query: 178 IGVLLMVFFLGSNPEVGGFSGMLSNLSSIDPMLVTPINEASFIPIMGLALLT----SIGS 233
              L++V     N   GGF+ +  +L++I+P L+T  N+A   P+  +A+++     +G 
Sbjct: 195 -AALMIVPIAAMN---GGFTQLNHDLAAINPELLTLWNDAKGEPLSAIAIISLVAWGLGY 250

Query: 234 WGLPQMIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGLT 293
           +G P ++ +F   +S K  ++A+ ++  +  +   GA  +G    +F   + +    GL 
Sbjct: 251 FGQPHILARFKASRSNKDLITARRIAVVWTGLSMAGAILVGLTGLIFVTQSGT---IGLD 307

Query: 294 SPDMIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSD 353
             + I   ++       +A ++L  +++A MST  S +L SSS ++ DF K   KTD S 
Sbjct: 308 DGEKIFMLLVNSLFHPVIAGILLAAILAAIMSTADSQLLVSSSALAEDFYKQVFKTDASS 367

Query: 354 KNTMILMRLLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTKE 413
           ++ + + R+  +L  +++  LA+ P+S VL L++ +W            L LYW R  + 
Sbjct: 368 EDIVRVGRIAVILISLIALFLAMTPDSSVLGLVSYAWAGFGAAFGPALVLSLYWPRMNRH 427

Query: 414 GVWAG-ITSALAIMLGGAYYFGINSVYMPAVGSLAMIAPIFVVMAVSLIT-KPFEREHID 471
           G  +G I   + I++      G   VY    G   +I     ++ VSL+T +P E+    
Sbjct: 428 GALSGIIVGGVTIVVWKQLSGGWFDVYEIVPG---IILSTLSIVVVSLLTGEPDEKVKAQ 484

Query: 472 YIFNKK 477
           +   KK
Sbjct: 485 HATFKK 490