Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 106/436 (24%), Positives = 194/436 (44%), Gaps = 27/436 (6%)

Query: 1   MIIGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPT 60
           + I I+    +R  G +DF  GGR    + +  S    Y SA+ FIG  G + +  G+  
Sbjct: 16  LTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFIGMPGWV-YQSGMEA 74

Query: 61  MWIVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTAFIIFFFL 120
           + I +   I+  F     +      +  R+G +++  +LE R+    + + T   + F L
Sbjct: 75  LNIHLNYPIVIFFAVVFFI-----PVFYRMGFTSIYEYLEHRF---GVYARTINSVVFIL 126

Query: 121 VPYSAS---IYKGLNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMV 177
           V   +S   +Y     L +   IS + A + +   TA Y Y GG       D +Q  +++
Sbjct: 127 VQCISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTVIWTDMLQSAVLI 186

Query: 178 IG-VLLMVFFLGSNPEVGGFSGMLSNLSSIDPMLVTPINEASFIPIMGLALLTSIGSWGL 236
            G V + V  L     V G S     L+ I+      ++   +  ++ ++ L  +  +G 
Sbjct: 187 AGSVAIFVLLLLQVDGVHGVSR--EQLNIINLQFDLGVDTTLWAGVVAVSFL-HMSVYGT 243

Query: 237 PQMI-HKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGLTSP 295
            Q+I  +    + EK A  +  +    AF I F  A +G +  +FY +          S 
Sbjct: 244 NQLIIQRTLATRCEKTAQKSMLLCGYGAFFIYFFFALLGVLLSIFYQERHFT-----NSN 298

Query: 296 DMIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSDKN 355
           ++I+  +     P WV  LI+  + +A+MSTL S   + ++V + D  +  ++ +  D +
Sbjct: 299 EVILDFVFHHTNP-WVIGLIISALAAAAMSTLDSTYNSMATVATFDLYQRFIRRNAPDHH 357

Query: 356 TMILMRLLCVL---FVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTK 412
              + R + ++    VV+  +LA V N  VL  +A    +  G  L  + LGL+  +  +
Sbjct: 358 YQAVARKMSLVAAGLVVIPALLA-VSNESVLKTIASLTSIFVGIRLGSFVLGLFSNQANE 416

Query: 413 EGVWAGITSALAIMLG 428
           +GV AG   ++A +LG
Sbjct: 417 KGVIAGSIISIAAVLG 432