Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (328), Expect = 9e-35
 Identities = 133/547 (24%), Positives = 225/547 (41%), Gaps = 85/547 (15%)

Query: 1   MIIGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPT 60
           + IGIA     R    S+F + G  V+P  +  +    + SA  FI  AG + +     T
Sbjct: 17  LYIGIAIWA--RAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGIISFIGYDGT 74

Query: 61  MWIVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTAFIIFFFL 120
           ++++      G    + +L        ++ G  T+P F+  RY S+    +  F   F  
Sbjct: 75  VYLM------GWTGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARMVAVFCAIFIS 128

Query: 121 VPYSASIYKGLNFLFEGFGISPMNAYILMA-ALTAIYLYFGGFIAATLADFVQGCIMVIG 179
             Y A   +G+  +F  F    +N  I++  A+   Y   GG    T     Q C+++  
Sbjct: 129 FTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITYTQVAQYCVLIFA 188

Query: 180 VLLMVFF----LGSNPEVG-GFSGMLSN-----LSSIDPMLVT------PINEASFIPIM 223
            L+   F    +  NP    GF   L+      L+ +D + V            S + + 
Sbjct: 189 FLVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLAVELGFTAYTDGSKSMVDVF 248

Query: 224 GLALLTSIGSWGLPQMIHKFYTI-KSEKAAVSAKWVSTAFAFIITFGAAY-----IGTVS 277
            +     +G+ GLP +I +F+T+ K   A VSA W     AF+ T   A      +  + 
Sbjct: 249 FICAALMVGTAGLPHVIIRFFTVPKVSDARVSAGWALVFIAFLYTTAPAVAAFARVNMID 308

Query: 278 RLFYPDAASKAAA------------GLT-----------------------SPDMIVPKI 302
            +  PD     AA            GL                        + D+IV   
Sbjct: 309 TINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFYSGDARNEMTINNDIIVLAS 368

Query: 303 MEIA-LPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSDKNTMILMR 361
            EIA LP+WV AL+    ++A++ST A L+L  S+ +S D +K   K D++DK  ++  R
Sbjct: 369 PEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISHDLLKKGFKPDMTDKQELLAAR 428

Query: 362 LLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTKE----GVWA 417
           +   L +V +  L I P  +V  ++A ++GL +        LG+++K+  KE    G+ A
Sbjct: 429 IAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYKKMNKEGAIIGMLA 488

Query: 418 GITSALAIML-----------GGAYYFGINSVYMPAVGSLAMIAPIFVVMAVSLITKPFE 466
           GIT   A ++              ++FGI+      +G+L M     V + V+  T    
Sbjct: 489 GITFTAAYIIYFKFINPAASVPANWWFGISP---EGIGTLGMCLNFVVAIVVNKFTAEVP 545

Query: 467 REHIDYI 473
           ++  D +
Sbjct: 546 QDVQDMV 552