Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 498 a.a., sodium/proline symporter (RefSeq) from Shewanella loihica PV-4

 Score =  139 bits (351), Expect = 2e-37
 Identities = 110/420 (26%), Positives = 200/420 (47%), Gaps = 13/420 (3%)

Query: 16  VSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPTMWIVVGNTIIGSFLA 75
           VS ++LGGR V+P ++A S G +  S  + +G  G M +  G  T++I +G  ++G+ + 
Sbjct: 31  VSGYILGGRQVSPQVTALSAGASDMSGWMLMGLPGAM-FLVGFETIYIALG-LLLGALVN 88

Query: 76  WQVLGKKTREMTQRLG-ASTMPSFLEKRYK--SKNLESLTAFIIFFFLVPY-SASIYKGL 131
           + ++  K R  T+    A T+P F  KR+   S N+  ++A II  F   Y SA +  G 
Sbjct: 89  YLIVAPKLRVYTEVANNALTIPEFFAKRFHDPSCNVRIISAAIIVIFFTLYTSAGLVAGG 148

Query: 132 NFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMVIGVLLMVFFLGSNP 191
                 F ++     ++   +   Y   GGF+A +L DFVQGCIM + ++L+     +  
Sbjct: 149 KLFESAFEVNYELGLVITLGVVVSYTLLGGFLAVSLTDFVQGCIMFVALILVPVV--AYQ 206

Query: 192 EVGGFSGMLSNLSSIDPMLVTPINEASFIPIMGLALLTSIGSWGLPQMIHKFYTIKSEKA 251
           E      M++      P     +   + + ++  AL   +G +G P +I +F  I+S   
Sbjct: 207 EFSNADKMMNFAYESIPHFGEAMQNVTLLGLIS-ALSWGLGYFGQPHIIVRFMAIRSVSD 265

Query: 252 AVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGLTSPDMIVPKIMEIALPDWV 311
             +AK +  ++  +   GA   G V   +    A+K    L+ P+ I     E+     +
Sbjct: 266 IKTAKNIGMSWMTVTIIGALATGLVGIAY----ANKFDMKLSDPETIFIVFSELLFHPLI 321

Query: 312 AALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSDKNTMILMRLLCVLFVVLS 371
           +  +L  +++A MST++S +L SSS ++ D  +   K + S++  + L R       +++
Sbjct: 322 SGFLLAAILAAIMSTISSQLLVSSSSLTEDIYRVVSKKEASEEEMVKLGRFGVAGVAIVA 381

Query: 372 FILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTKEGVWAGITSALAIMLGGAY 431
            +LA+  ++ +LSL++ +W              LY K  T +   AGI +  A +L   Y
Sbjct: 382 SLLALDRSNSILSLVSNAWAGFGAAFGPLVLFSLYKKNLTHKAAVAGIVAGAATVLFWIY 441