Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 483 a.a., sodium/proline symporter (RefSeq) from Shewanella loihica PV-4

 Score =  189 bits (480), Expect = 2e-52
 Identities = 135/484 (27%), Positives = 242/484 (50%), Gaps = 26/484 (5%)

Query: 1   MIIGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPT 60
           +++GI     K    V D++LGGR++ P ++A S G +  S  + +G  G + +  G+  
Sbjct: 17  LMMGIGLWAYKATDSVDDYILGGRSMGPAVTALSVGASDMSGWLLLGLPGAV-YLGGLGE 75

Query: 61  MWIVVGNTIIGSFLAWQVLGKKTREMTQRL-GASTMPSFLEKRYKSKN--LESLTAFIIF 117
            WI +G  + G++L W  + K+ R  TQ    A T+P F EKR++ K   L+ ++A  I 
Sbjct: 76  AWIGIG-LVFGAWLNWLFVAKRLRIYTQFTDNALTLPDFFEKRFEDKQSVLKLVSAVTIL 134

Query: 118 FFLVPYSASIYKGLNFLFEG-FGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIM 176
            F   Y++S   G   LFE  FG+    A ++ + +   Y + GGF A +  DF QGC+M
Sbjct: 135 VFFTFYTSSGMVGGAILFEKVFGLDYNLALLIGSGIIVAYTFVGGFFAVSWTDFFQGCLM 194

Query: 177 VIGVLLMVFFLGSNPEVGGFSGMLSNLSSIDPMLVTPINEASFIPIMGLALLTSIGSWGL 236
           +I +L++   + S PE        + + S+DP +++ +++ + +  +   L   +G +G 
Sbjct: 195 LIALLIVPVTIFSQPETQ------NGIHSLDPAMLSLLSDNTTMIGLASLLAWGLGYFGQ 248

Query: 237 PQMIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGLTSPD 296
           P ++ +F  I S      ++ ++ ++  +   GA   G    L++ D        + +P+
Sbjct: 249 PHILSRFMAIGSADDLKVSRRIAMSWMIVALMGALATGLAGTLYFADQP------IDNPE 302

Query: 297 MIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSDKNT 356
            I   +   A   W+  L++  ++SA MST+ S +L  SSV++ DF K  L+ D S K  
Sbjct: 303 TIFIHLAHAAFNPWIGGLLVAAILSAIMSTIDSQLLVCSSVITEDFYKKWLRPDASSKEL 362

Query: 357 MILMRLLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTKEGVW 416
           M++ R+  +   V+S ++A+ P S VLSL++ +W            L L+W+  ++ G  
Sbjct: 363 MMIGRIGVLTIAVISGVIALNPESSVLSLVSYAWAGFGAAFGPVVILSLFWRGYSRNGAV 422

Query: 417 AG-ITSALAIMLGGAYYFGINSVYMPAVGSL-AMIAPIFVVMAVSLITKPFE--REHIDY 472
           A  I  A+ ++L      GI  +Y    G L A +A +     VSL++ P +  RE  + 
Sbjct: 423 ATIIVGAITVVLWKQSTGGIFDLYEILPGFLFATLAGVL----VSLVSAPADSTREQFEQ 478

Query: 473 IFNK 476
              K
Sbjct: 479 FSQK 482