Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 572 a.a., actP-like component of L-lactate and L-malate uptake system (from data) from Shewanella loihica PV-4

 Score =  117 bits (292), Expect = 1e-30
 Identities = 127/552 (23%), Positives = 217/552 (39%), Gaps = 90/552 (16%)

Query: 1   MIIGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKM---GWSFG 57
           + IGIA  +  R     +F + G  V+P M+  +    + SA  FI  AG +   G+   
Sbjct: 17  LYIGIAIWS--RAGSTKEFYVAGGGVHPVMNGMATAADWMSAASFISLAGIVSFVGYDGS 74

Query: 58  IPTMWIVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTAFIIF 117
           +  M    G  ++   +A            ++ G  T+P F+  RY S+   ++      
Sbjct: 75  VYLMGWTGGYVLLALCMA---------PYLRKFGKFTVPDFIGDRYYSQAARTVAVVCAI 125

Query: 118 FFLVPYSASIYKGLNFLFEGFGISPMNAYILMA-ALTAIYLYFGGFIAATLADFVQGCIM 176
           F    Y A   +G+  +F  F    ++  + +  A+   Y   GG    T     Q C++
Sbjct: 126 FICFTYIAGQMRGVGVVFSRFLEVEVDTGVYIGMAVVFFYAVLGGMKGITYTQVAQYCVL 185

Query: 177 VIGVLLMVFF------------LGSNPEVGGFSG------MLSNLSSIDPML-VTPINEA 217
           +   ++   F            LG   E+   +G      +L  L  +   L  +   E 
Sbjct: 186 IFAFMVPAIFISVMMTGHILPQLGFGAELVDAAGNNTGVYLLEKLDGLSAQLGFSQYTEG 245

Query: 218 S--FIPIMGLALLTSIGSWGLPQMIHKFYTI-KSEKAAVSAKWVSTAFAFIITFGAAY-- 272
           S   I +  +      G+ GLP +I +F+T+ K + A VSA W     A + T   A   
Sbjct: 246 SKGMIDVFFITGALMFGTAGLPHVIVRFFTVPKVKDARVSAGWALVFIAIMYTTIPALAA 305

Query: 273 ---IGTVSRLFYPDAASKA------------------------------AAGLTSPDMIV 299
              +  +  +  P++   A                              A G T+   I 
Sbjct: 306 FSRVNMIETINGPESTGVAYETAPDWIKNWEKTGLIKWDDKNNDGKIYYAKGETNEMKID 365

Query: 300 PKIMEIA------LPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSD 353
             IM +A      LP WV AL+    ++A++ST A L+L  S+ VS D +K     D+SD
Sbjct: 366 RDIMVLATPEIANLPAWVIALVAAGGLAAALSTSAGLLLVISTSVSHDLLKKNFMPDISD 425

Query: 354 KNTMILMRLLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTKE 413
           K  ++  R+   L +V++    I P  +V +++A+++GL +  L     +G++ +   KE
Sbjct: 426 KQELLYARIAAALGIVMAGYFGINPPGFVAAVVAIAFGLAASSLFPAIIMGIFSRTMNKE 485

Query: 414 GVWAGITSALAIMLGGAYYF-----GINS-------VYMPAVGSLAMIAPIFVVMAVSLI 461
           G  AG+   L        YF     G N+       +    +G L MI    V   VS +
Sbjct: 486 GAIAGMVIGLLFSASYIIYFKFVNPGDNNASNWLFGISPEGIGMLGMIINFAVAFIVSKV 545

Query: 462 TKPFEREHIDYI 473
           T    +  +D +
Sbjct: 546 TAAVPQNVVDMV 557