Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 519 a.a., SSS family solute/sodium (Na+) symporter (RefSeq) from Shewanella loihica PV-4

 Score = 97.8 bits (242), Expect = 8e-25
 Identities = 111/492 (22%), Positives = 217/492 (44%), Gaps = 69/492 (14%)

Query: 1   MIIGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPT 60
           + + I+   K+  +   D+ L G+ +  W    S   +  SA   IG +G  G++ G+  
Sbjct: 20  LALWISRQDKRHERDTKDYFLAGKALPWWAIGASLIASNISAEQIIGMSGS-GYAIGLAI 78

Query: 61  M---WIVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTAF-II 116
               W+     I+        +GK    +  +    TMP +LE+R+  +   +L  F + 
Sbjct: 79  ASYEWMAAITLIL--------VGKYMLPIFIKNEIYTMPQYLEQRFDKRVKTTLALFWLS 130

Query: 117 FFFLVPYSASIYKGLNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIM 176
            + LV  +A ++ G   +    GI  +   + +A  +  Y  +GG  A    D +Q  ++
Sbjct: 131 VYILVNLTAVLWLGGLAIETVAGIDWLYGMVFLALFSLAYSLYGGLKAVAYTDIIQVVLL 190

Query: 177 VIGVLLMVFFLGSNPEVG-----GFSGMLSNLSSIDPMLVTPINEASFIPIMGLALLT-- 229
           + G LL+ +        G     GF  + S L     M+++  N   ++ + G+++L   
Sbjct: 191 IFGGLLLSYLALDRVADGQGVLAGFDRLSSALPEHFEMILSQSNP-HYMSLPGISVLVGG 249

Query: 230 ----SIGSWGLPQMIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYI-----------G 274
               +I  WG  Q     Y I+   AA S        AF     AAY+           G
Sbjct: 250 LWIMNISYWGFNQ-----YIIQRALAAKSVAEAQKGIAF-----AAYLKLLMPLIVVLPG 299

Query: 275 TVSRLFYPDAASKAAAGLTSPDMIVPKIMEIALPDWVAALILVLVISASMSTLASLVLAS 334
             + L YP        GL SPD   P +M + +P  V  L+   +++A +S+LAS+  + 
Sbjct: 300 IAAVLLYP--------GLESPDQAYPSMMAL-MPAGVKGLVFAALVAAIVSSLASMTNSI 350

Query: 335 SSVVSIDFVKGRLKTDLSDKNTMILMRLLCVLFVVLSFILA---IVPNSYVLSLMALSWG 391
           S++ ++D +   L+   S+ + +++ RL  ++ ++++ ++A   +         +    G
Sbjct: 351 STIFTMD-IYAMLRPAKSEGHYVLVGRLSSLISLLIALVMAQPLLGEFEQAFQYIQEFTG 409

Query: 392 LVSGCLLAPYFLGLYWKRTTKEGVWAGITSALAIMLGGAYY-FGINSVYMPAVGSLAMIA 450
           + +  ++  +  G++W+R T +G       ALA  LG A + FG+   Y P +  +  I 
Sbjct: 410 VFTPGIVVIFLTGMFWRRATSQG-------ALAAALGSAIFSFGLR-FYWPELPFMDRIG 461

Query: 451 PIFVV-MAVSLI 461
            +F++ +A+S++
Sbjct: 462 LVFLLCLALSVL 473