Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 483 a.a., sodium/proline symporter (RefSeq) from Shewanella sp. ANA-3

 Score =  187 bits (475), Expect = 7e-52
 Identities = 130/471 (27%), Positives = 238/471 (50%), Gaps = 22/471 (4%)

Query: 1   MIIGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPT 60
           +++GI     +    V D++LGGR + P ++A S G +  S  + +G  G + +  G+  
Sbjct: 17  LMMGIGFWAYRATDTVDDYILGGRKMGPAVTALSVGASDMSGWLLLGLPGAV-YLGGLGE 75

Query: 61  MWIVVGNTIIGSFLAWQVLGKKTREMTQRL-GASTMPSFLEKRYKSKN--LESLTAFIIF 117
            WI +G  ++G++L W  + K+ R  TQ    A T+P F EKR+  K   L+ ++A  I 
Sbjct: 76  AWIGIG-LVVGAWLNWLFVAKRLRIYTQLADNALTLPDFFEKRFHDKQGYLKLVSAVTIL 134

Query: 118 FFLVPYSASIYKGLNFLFEG-FGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIM 176
            F   Y++S   G   LFE  FG+    A ++ +A+   Y + GGF A +  DF QGC+M
Sbjct: 135 VFFTFYASSGMVGGAILFEKVFGLDYTVALVIGSAIIVGYTFIGGFFAVSWTDFFQGCLM 194

Query: 177 VIGVLLMVFFLGSNPEVGGFSGMLSNLSSIDPMLVTPINEASFIPIMGLALLTSIGSWGL 236
           +I +L++ F + S+PE        + + SIDP ++  I++ + +  +   L   +G +G 
Sbjct: 195 LIALLIIPFAVFSHPESH------AGIESIDPAMLALISDKTTVIGLLSLLAWGLGYFGQ 248

Query: 237 PQMIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGLTSPD 296
           P ++ +F  I +  A   ++ ++ ++  +   GA   G    L++      A   L + +
Sbjct: 249 PHILSRFMAIGTADALPLSRRIAMSWMMLSLIGALATGLAGSLYF------ANQPLANAE 302

Query: 297 MIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSDKNT 356
            +   + + A   W+  L++  ++SA MST+ S +L  SSV++ DF +  L+    D+  
Sbjct: 303 TVFIHLAQAAFNPWIGGLLIAAILSAIMSTIDSQLLVCSSVITEDFYRKWLRPQADDREL 362

Query: 357 MILMRLLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTKEGVW 416
           M++ R+  +   V++ I+A+ P S VLSL++ +W            L L+WK+ ++ G  
Sbjct: 363 MMVGRMGVLAIAVIAGIIALNPESSVLSLVSYAWAGFGAAFGPVVLLSLFWKQYSRNGAI 422

Query: 417 AG-ITSALAIMLGGAYYFGINSVYMPAVGSLAMIAPIFVVMAVSLITKPFE 466
           A  I  AL +++      GI  +Y    G    +  I   + VS +++P E
Sbjct: 423 ATIIVGALTVVIWKQLTGGIFDLYEILPG---FVFAIIAGVVVSKMSRPAE 470