Pairwise Alignments

Query, 691 a.a., cadmium-translocating P-type ATPase from Methanococcus maripaludis S2

Subject, 915 a.a., copper-exporting P-type ATPase A from Vibrio cholerae E7946 ATCC 55056

 Score =  278 bits (710), Expect = 1e-78
 Identities = 195/689 (28%), Positives = 349/689 (50%), Gaps = 55/689 (7%)

Query: 5   ILKGLCCAGCASKIEK-LLKEQGYPSAVINMATSELILDEKEIDLEKITKIVTS--IEPG 61
           ++KG+ CA C + +EK LL  +G  SA +N+     ++     + + +   + S   +  
Sbjct: 177 LIKGMTCASCVASVEKALLSVEGVQSAQVNLTEQSALVRGIFANPQPLLNAIQSSGYQAE 236

Query: 62  VIVIPKQSEIK-------ITNEIDYNELKKIVISSVFFILGIFSSHFGYSLSIQLLFF-- 112
           ++  P Q + K       +  E   + L  I + +   + G+F  +     S   + +  
Sbjct: 237 ILDDPAQQQAKQQAQLEALQKEHKQSALLGIALGTPLMLWGVFGGNMMIRNSSDQMVWGG 296

Query: 113 -----IVSYILVGQKVLKKTFQNIKRLDFFDENFLMSIATIGAF----LIGEYP------ 157
                    +  G+      +Q +        + L+++ T  A+    L+  +P      
Sbjct: 297 IGTICFALLLTAGRHFFMNAWQALTH-GRATMDTLVALGTGAAWFYSMLVVAWPQTFPDA 355

Query: 158 ------EGVAVML-FYSIGEFFQNIAVTRSRNSIKSLVSIKAEYANVLENGETIKVKPEN 210
                 E  A+++   S+G + +  A + +  S+++L++++ + A ++       +   +
Sbjct: 356 ARHVYFEATAMIIGLISLGHYIETKAKSNTNRSLQALLNLQPQQATLVTEQGDQSIAVAD 415

Query: 211 VQIGQTIIIKPGEKVPIDGIVLNGKSSLDTSALTGESTPKSINRDEEVLSGMINLSGLLT 270
           +Q+G ++ IKPGE+VP+DG+V  G S LD S LTGE  P       +V +G +N  G L 
Sbjct: 416 IQLGMSLRIKPGEQVPVDGVVSTGHSYLDESMLTGEPIPVLKEAGAKVAAGTLNQDGSLV 475

Query: 271 VQTTKNFSDSAVSKILNLVESASINKTKTEKFITKFAKVYTPIIVFIAVLLAVVPPIIFN 330
           +  T   + + +++I+ +V  A  +K    +   + + V+ P++V IA+L A +  +   
Sbjct: 476 ITATGIGAQTMLARIIQMVRQAQSSKPAMARLADQISSVFVPVVVVIAILSAALWYLYGP 535

Query: 331 EPFVPW-FYKALILLVISCPCALVLSIPLGYFAGIGRLAKEGILVKGSNYIDVLSKTTYV 389
           +P   +    A  +L+I+CPCAL L+ PL    GIG+ A+ GIL++ +N +   S+   V
Sbjct: 536 DPKASYMLVVATTVLIIACPCALGLATPLSITVGIGKAAEMGILIRDANVLQTASQVDTV 595

Query: 390 SFDKTGTLTEGKFKVTK--VVSKNEFSGKKLLEIAKMVECNSNHPIAKTIMDFGTISCKT 447
            FDKTGTLT GK  +    V+  +E    +LL +A  +E  S HP+AK I D+       
Sbjct: 596 VFDKTGTLTLGKPSIQSLHVLQGDE---NQLLALAYALEQQSEHPLAKAICDYAK-QRNI 651

Query: 448 SLDDFEEFSEVLGKGIISRINGSEIIAGNEKLMEEKNIN-------FEKLDVYE-TAVHF 499
           S  +  +F+   G+G+++      ++ G+   M+E+ I+        EK      T V  
Sbjct: 652 SPVEISQFTNQRGRGLLADYQNQTVLVGSLAFMQEQGIDLSMAESTLEKFAAQAWTPVAV 711

Query: 500 AVDGVYAGYILISDKLKKDSKETVLELKKLGIKKVSMLTGDKKDIAEKIASELNLDEYYS 559
           A  G+  G + I+D +K  S + V +L +LGI  V MLTGD   +A  IA EL + +  +
Sbjct: 712 AYRGMLQGVLAIADPIKPTSAQAVRKLNELGIHTV-MLTGDHTSVANAIAKELGISQVIA 770

Query: 560 DLLPEDKVKIIEEIEANKSKKETIAFVGEGINDAPVIARADVGISMGTLGSDAAIETADV 619
            +LP+ K    + I+A + +   +A +G+GINDAP +A AD+GI+MG+ GSD AIE+A +
Sbjct: 771 QVLPDQKA---QHIQALQQQGRKVAMIGDGINDAPALALADIGIAMGS-GSDVAIESAQM 826

Query: 620 VIMNDKPSKLISAIKISKRTQNIAFQNIF 648
            ++N  P+ ++SAI++SK T     QN+F
Sbjct: 827 TLLNSSPTSVVSAIELSKATLRNMKQNLF 855



 Score = 26.6 bits (57), Expect = 0.006
 Identities = 10/19 (52%), Positives = 14/19 (73%)

Query: 6  LKGLCCAGCASKIEKLLKE 24
          L+GL C GCA K+E+ L +
Sbjct: 17 LRGLNCMGCARKLERQLNQ 35