Pairwise Alignments

Query, 299 a.a., DMT family transporter from Methanococcus maripaludis S2

Subject, 296 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 76.6 bits (187), Expect = 6e-19
 Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 19/290 (6%)

Query: 10  LFLLMIPAVFFGAGAFITGKIGILELSWDELTFLRFLIASAIILPLVLKKEHKNLK---- 65
           L+L  + AV   AG  I  K+    ++ + + F R+  A  I+ P +LK   KN +    
Sbjct: 2   LYLFPLLAVVIWAGNAIVNKLSFGIIAPEAIAFYRWFFAMLILTPFMLKSVWKNRRRIIP 61

Query: 66  -LKKNDAYIVILAGLFGMFGYHALFFMSLEYITAINSALLMATTPMVTSIIAAVVLGEYF 124
            L K    +  LA L GM    +L + +    TA N AL+ +  PM++  +A  +L +  
Sbjct: 62  LLPK----LATLASL-GMVLNQSLAYFAAATTTATNMALINSLVPMISLFLAVPLLKQRL 116

Query: 125 GIKRIFAVFIAFFGVLLTITNGNLEVLKNLSFNI--GDVIMFSAVLCMALYAVLSKKVAQ 182
               +    I+  G++  +++G+   + NL+  +  GD+++  +    ALY VL K+   
Sbjct: 117 SPLVLGGSVISLLGLVFMLSHGD---IANLAIGVTEGDLLLLISAFVYALYGVLLKRWQL 173

Query: 183 KYSPSLILTYGYILTVVLLIPYMILKNPINVILNASLETWLSIIYMAVFASVLAQLLQQI 242
             S    +    I+ V++L P +     I +    S +    I+Y A  AS++A      
Sbjct: 174 PISTWESVYIQGIIAVLMLTPLLFSAPSIAI----SSQATPLIVYAAFGASLIAPWAWIN 229

Query: 243 SLKYHGASKTMLFYQFVPIIVIGLSAIFLKEPFTKITAISTLFIMGGVYI 292
            +   GA +T +F+  +PI+    +AI L E       +    ++ GV +
Sbjct: 230 GINKLGAERTSIFFNLMPILAAIFAAIILNETLAIYHYLGGTMVILGVML 279