Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 388 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  186 bits (471), Expect = 1e-51
 Identities = 119/331 (35%), Positives = 179/331 (54%), Gaps = 18/331 (5%)

Query: 21  KTPSFNLKSKFSID--SGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGRIIVNNEIYYDSD 78
           K   F   +  S+D   G  + L G SG GKT+ L  +AG   P +GRI++      D  
Sbjct: 39  KFGDFTAVAGVSLDVFEGEFLCLLGGSGCGKTTLLRMMAGFEQPTSGRILI------DGR 92

Query: 79  KNINMSPQERNLGYVFQNYALFPHLTVKENIEYGIKH--LSEEEKERRVFELLKLTQIEG 136
               + P +R +  +FQ+YALFPH++V++NI +G+K   + + E+E RV E+L L Q+E 
Sbjct: 93  DMTGVPPYDRPVNMMFQSYALFPHMSVEQNIAFGLKQDGMPKAEREARVAEMLSLVQLER 152

Query: 137 LENRYPDQISGGQKQRVALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKI 196
              R P Q+SGGQ+QRVALAR+LA  P++LLLDEP SALD   R R +  L +IQ++  I
Sbjct: 153 FAKRKPHQLSGGQRQRVALARSLAKHPRVLLLDEPLSALDKKLRERTQLDLVNIQEKTGI 212

Query: 197 PVVFVTHSFEEAFVMAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVGYINIFSNAEI 256
             V VTH  EEA  MA++V     G I QI  P+ ++  P    VA+  G +N+F    +
Sbjct: 213 TFVVVTHDQEEAMTMADRVAIMDEGWIVQIDAPQSMYEYPNTRFVAEFFGSVNMFEGVLV 272

Query: 257 DYNENSPDFSILDYRDMKMSIKKFNKSMNE----VSFGIRPENIKLIDINSEKTENVFEC 312
              E+ PD  +++  +++  I   +         V   +RPE + L+    ++  N    
Sbjct: 273 ---EDEPDHVMIEAPELENPIYVGHGVSGHEGATVWAALRPEKVTLVTEKPDRPYNWAAG 329

Query: 313 IIKDVVNEGSTSLVYLEVIQNGLRLMSKTQN 343
            +KD+V  GSTS  Y+  +  G R+     N
Sbjct: 330 EVKDIVYLGSTS-TYIVGLDTGKRMRVTVAN 359