Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 378 a.a., spermidine/putrescine ABC transporter ATPase subunit (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (484), Expect = 4e-53
 Identities = 116/321 (36%), Positives = 175/321 (54%), Gaps = 16/321 (4%)

Query: 32  SIDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGRIIVNNEIYYDSDKNINMSPQERNLG 91
           +I+ G I  L G SGSGK++ L  +AG   P  GRI      Y D     +M P ER + 
Sbjct: 42  NINRGEIFALLGGSGSGKSTLLRMLAGFEKPTEGRI------YLDGQDITDMPPYERPIN 95

Query: 92  YVFQNYALFPHLTVKENIEYGIKH--LSEEEKERRVFELLKLTQIEGLENRYPDQISGGQ 149
            +FQ+YALFPH+TV +NI +G+K   + + E E+RV E+LKL  +E    R P+Q+SGGQ
Sbjct: 96  MMFQSYALFPHMTVAQNIAFGLKQDKMPKAEIEQRVKEMLKLVHMEPYAKRKPNQLSGGQ 155

Query: 150 KQRVALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKIPVVFVTHSFEEAF 209
           +QRVALAR+LA  PK+LLLDEP  ALD   R +++  +  I + + +  V VTH  EEA 
Sbjct: 156 RQRVALARSLAKRPKLLLLDEPMGALDKKLRTQMQLEVVDILEAVGVTCVMVTHDQEEAM 215

Query: 210 VMAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVGYINIFSNAEIDYNENSPDFSILD 269
            MAE++   ++G I Q G+P +I+ +P N  VA+ +G +N+F   E D  E+  D  +++
Sbjct: 216 TMAERIAIMNDGWIAQTGSPMDIYESPANRMVAEFIGSVNLF---EGDIVEDEVDHVVIN 272

Query: 270 YRDMKMSI-----KKFNKSMNEVSFGIRPENIKLIDINSEKTENVFECIIKDVVNEGSTS 324
             ++            +    +V   IRPE   +     E   N     ++D+   G  S
Sbjct: 273 VANIPQPFYVGYGVSTSVDTTQVWVAIRPEKTHISREQPEDARNWCAGKVEDIAYLGGIS 332

Query: 325 LVYLEVIQNGLRLMSKTQNDK 345
           + Y+ +    L     T +D+
Sbjct: 333 VYYIRLCNGQLIQSVMTNSDR 353