Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 342 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  186 bits (473), Expect = 6e-52
 Identities = 98/220 (44%), Positives = 139/220 (63%), Gaps = 2/220 (0%)

Query: 33  IDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGRIIVNNEIYYDSDKNINMSPQERNLGY 92
           +  G I  L G SG GKT+ L  IAGL     GRI +N  +   S     +  + R +G 
Sbjct: 26  LHQGEIAALLGPSGCGKTTLLKAIAGLQPISQGRISINGRLL--SGPETFVPSERREVGM 83

Query: 93  VFQNYALFPHLTVKENIEYGIKHLSEEEKERRVFELLKLTQIEGLENRYPDQISGGQKQR 152
           +FQ+YALFPHLTV ENI +G+K L +  ++ R+ E+L L ++EGL  RYP ++SGGQ+QR
Sbjct: 84  IFQDYALFPHLTVAENILFGVKGLDKAARQARLGEMLALVKLEGLGGRYPHELSGGQQQR 143

Query: 153 VALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKIPVVFVTHSFEEAFVMA 212
           V++ARALA  P++LLLDEPFS +D   R  +   +R I K+  +  VFVTHS +EAFV A
Sbjct: 144 VSIARALAYEPELLLLDEPFSNIDAKVRGEMMVEIREILKQRGVSAVFVTHSKDEAFVFA 203

Query: 213 EKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVGYINIFS 252
           +K+  F +G I Q G+ E ++  P +  VA+ +G +N  S
Sbjct: 204 DKLALFKDGGIAQYGSAESLYAEPTDKYVAEFLGQVNYLS 243