Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 378 a.a., polyamine ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  184 bits (466), Expect = 5e-51
 Identities = 116/310 (37%), Positives = 174/310 (56%), Gaps = 17/310 (5%)

Query: 32  SIDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGRIIVNNEIYYDSDKNINMSPQERNLG 91
           +I+ G I  L G SGSGK++ L  +AG   P +GRI      Y D +   ++ P ER + 
Sbjct: 42  TINKGEIFALLGGSGSGKSTLLRMLAGFERPTSGRI------YLDGEDITDLPPYERPIN 95

Query: 92  YVFQNYALFPHLTVKENIEYGIKH--LSEEEKERRVFELLKLTQIEGLENRYPDQISGGQ 149
            +FQ+YALFPH+TV +NI +G+K   L + E E+RV E+LKL  +E    R P Q+SGGQ
Sbjct: 96  MMFQSYALFPHMTVAQNIAFGLKQDKLPKAEIEQRVQEMLKLVHMEQYGKRKPHQLSGGQ 155

Query: 150 KQRVALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKIPVVFVTHSFEEAF 209
           +QRVALAR+LA  PK+LLLDEP  ALD   R +++  +  I + + +  V VTH  EEA 
Sbjct: 156 RQRVALARSLAKRPKLLLLDEPMGALDKKLRTQMQLEVVEILERVGVTCVMVTHDQEEAM 215

Query: 210 VMAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVGYINIFSNAEIDYNENSPDFSILD 269
            MA ++    +G I Q G+P +I+ +P +  +A+ +G +N+FS  EI+ +E   D  I+ 
Sbjct: 216 TMAGRISIMSDGWIAQTGSPMDIYESPNSRMIAEFIGSVNLFS-GEIEVDE--VDHLIIK 272

Query: 270 YRDMKMSI-----KKFNKSMNEVSFGIRPENIKLIDINSEKTENVFECIIKDVVNEGSTS 324
             D+  S         +     V   +RPE   +     E   N  + I+ D+   G  S
Sbjct: 273 PNDLARSFYVGYGVTTSLEDKRVWLAVRPEKTIISREQPEGEYNWAKGIVHDIAYLGGIS 332

Query: 325 LVYLEVIQNG 334
           + Y+  ++NG
Sbjct: 333 VYYIR-LENG 341