Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 368 a.a., polyamine ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  194 bits (493), Expect = 3e-54
 Identities = 119/328 (36%), Positives = 198/328 (60%), Gaps = 13/328 (3%)

Query: 33  IDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGRIIVNNEIYYDSDKNINMSPQERNLGY 92
           I +G  + L G SG GKT+ L  I+G   PD G I +  +   D+       P+ R +  
Sbjct: 30  IRNGEFLTLLGPSGCGKTTILRLISGFEKPDAGVITLKGQRMDDAP------PEARQVNT 83

Query: 93  VFQNYALFPHLTVKENIEYGIK--HLSEEEKERRVFELLKLTQIEGLENRYPDQISGGQK 150
           VFQNYALFPH++V+EN+ +G++     ++E  RRV + L++  +E   +R P Q+SGGQ+
Sbjct: 84  VFQNYALFPHMSVRENVGFGLRMQRRPKDEIARRVHDALRMVHLEAHADRRPRQLSGGQQ 143

Query: 151 QRVALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKIPVVFVTHSFEEAFV 210
           QRVA+ARA+  +P +LLLDEPFSALD   R +++  ++ +Q++L I  VFVTH  EEAF 
Sbjct: 144 QRVAIARAVVNNPLVLLLDEPFSALDYKLRKQMQLEIKHLQRQLGITFVFVTHDQEEAFA 203

Query: 211 MAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVGYINIFSNAEIDYNENSPDF-SILD 269
           M+++VV  ++G+I+QIG+P+EI+  P N  VA+ VG INI  NA I  N     + ++++
Sbjct: 204 MSDRVVVMNDGKIEQIGSPQEIYEEPANLYVARFVGEINIL-NAVIAANHGDGLYDAVIE 262

Query: 270 YRDMKMSIKKFNKSMNEVSFGIRPENIKLIDINSEKTENV-FECIIKDVVNEGSTSLVYL 328
                +  ++     ++V+  +RPE++++  +  ++         I++ V +G+T +  +
Sbjct: 263 GVTFPIRSQRTFAPGDKVNVLLRPEDLRVYTLTEDRPAGPHLTGRIEESVYKGAT-VDLI 321

Query: 329 EVIQNGLRLM-SKTQNDKFKKLNYAVGE 355
             + +G RLM ++  N+    +NY  GE
Sbjct: 322 VTLSDGRRLMAAEFFNEDDVDINYNPGE 349