Pairwise Alignments

Query, 318 a.a., permease from Methanococcus maripaludis S2

Subject, 346 a.a., hypothetical protein from Klebsiella michiganensis M5al

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 13/243 (5%)

Query: 74  GNIMASLLGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGW 133
           G ++ +        C+C + P+  G  +  V +G  L+F + +P++N A    +    GW
Sbjct: 111 GTLLGAAFSLPGMMCTCCAAPVAAGMRKQQVSMGGALAFWLGNPLLNPATLVFMGFVLGW 170

Query: 134 QIAMIYVVSGVIIGVVGGLIIGKLGMENQVEEYVYSIRSRARKIKEL-TQKERLKFAYDS 192
           Q A+I +++G+   +V   +         V+++V    ++   + EL  +  +  F    
Sbjct: 171 QFALIRLLAGLATVLVVATL---------VQKWVKEAATQPADVPELPAETAQGGFFSRW 221

Query: 193 TRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGP-ENPLAVIFATIIAVPLYS-NAL 250
            R +    W  I + I +  ++ G A   +     G  +N L  + A  IA  L+     
Sbjct: 222 LRALWTLFWNTIPVYI-LAVLVLGAARVWLFPHADGVVDNTLFWVIAMAIAGCLFVIPTA 280

Query: 251 GTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIVIT 310
             IPI + ++  G+G+  ALA ++   A+S P  ++LRK    K + +  G+ ++   + 
Sbjct: 281 AEIPIVQTMMLAGMGVAPALALLITLPAVSVPSLIMLRKAFPAKALWLTGGLVALCGAVA 340

Query: 311 GYL 313
           G L
Sbjct: 341 GGL 343



 Score = 36.6 bits (83), Expect = 9e-07
 Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 2/127 (1%)

Query: 186 LKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATIIAVPL 245
           L  A+D        VW   ++G+ +G++I    P + L +  G       +     ++P 
Sbjct: 63  LAAAWDYALVYFLAVWKAAVLGVLLGSLIQVLIPRDWLLRTLGQSRFRGTLLGAAFSLPG 122

Query: 246 YSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVI--KPKLIAVFFGIT 303
                   P+A  +  + V +G ALAF +    L+    V +  V+  +  LI +  G+ 
Sbjct: 123 MMCTCCAAPVAAGMRKQQVSMGGALAFWLGNPLLNPATLVFMGFVLGWQFALIRLLAGLA 182

Query: 304 SIAIVIT 310
           ++ +V T
Sbjct: 183 TVLVVAT 189