Pairwise Alignments

Query, 318 a.a., permease from Methanococcus maripaludis S2

Subject, 371 a.a., permease, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  230 bits (586), Expect = 5e-65
 Identities = 116/325 (35%), Positives = 195/325 (60%), Gaps = 12/325 (3%)

Query: 5   LDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPEKTKK 64
           L+  A +I   +L + + T +GSS+ FF+YD++KI++LL +M++ I+++R+    E+ + 
Sbjct: 42  LETWAEFITLKLLRIDISTRLGSSIVFFMYDTVKILMLLVMMVYGIAWMRAGLNVERVRT 101

Query: 65  ILERYSGVSGNIMASLLGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAF 124
            L       G  +A+  G VTPFCSCSSVP+FIGF  AG+PLG+T++FLITSP+VNE A 
Sbjct: 102 YLAGKRQALGYPLAACFGAVTPFCSCSSVPLFIGFSTAGIPLGITMAFLITSPLVNEVAV 161

Query: 125 AVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGMENQVEEYVYSIRSRA---------- 174
            +L    GW++ ++YV  G++ GV GG  +  +  E  ++ ++      A          
Sbjct: 162 VLLWGLLGWKLTLVYVGIGLLAGVFGGGCMSWVKAERWLQPFIRQAMRPAGGGLTPFAPL 221

Query: 175 --RKIKELTQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENP 232
                 ++T ++R  FA + T  I  RVW +++ G+ +GA +HGY P+E + +  G    
Sbjct: 222 PSAVAPKMTWRDRHSFAKNETSSIFSRVWKWVIGGVALGAALHGYLPQEWVEETLGKGQW 281

Query: 233 LAVIFATIIAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIK 292
            +V  A  + +PLY+N  G IP+ E+L+ KG+ IGT LA  M+    S PE ++L++V++
Sbjct: 282 WSVPAAVAVGIPLYANVTGIIPVMESLLLKGMPIGTTLALCMSAVGASLPEFIMLKQVMQ 341

Query: 293 PKLIAVFFGITSIAIVITGYLFNIL 317
            +L+A+F G+  +     G+L N++
Sbjct: 342 WRLLALFGGLLLVLFTCAGWLLNMV 366