Pairwise Alignments

Query, 260 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 285 a.a., iron-compound ABC transporter, ATP-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  123 bits (308), Expect = 5e-33
 Identities = 69/237 (29%), Positives = 127/237 (53%), Gaps = 7/237 (2%)

Query: 2   LRIENINFNYGKNKILNDCSFKLDSG--IGCILGPNGAGKSTILKCISGIVPVKSGSITI 59
           L +  +++      IL+  +F L  G  +G ++GPNGAGKS++L+C+   +    G I++
Sbjct: 3   LNVSQLSWTIEGKTILSGVNFALQRGEMLG-LIGPNGAGKSSLLRCLYRFIRPTQGQISL 61

Query: 60  DGEKTTQMKYKDRSRLISYSPQEFSINFPYTVFEVVLMGRNPHVNFLAGPSKKDEQKVTE 119
             +  +Q+  K  +  ++   Q+    F  T  ++V MG  PH       S  D  K+ +
Sbjct: 62  FSQDISQLSPKAFACKVAVVQQDTPHYFDMTTEQLVAMGLTPHKGMFDSHSSGDSDKIIK 121

Query: 120 ILNLLKISHLKDKEFISLSGGQKRLVMIATALIQDAKLMIFDEPTSFLDYKNQYLVLSVI 179
            L  + +SH   +++  LSGG+K+  +IA A++Q   L+I DEPT+ LD + Q  +L ++
Sbjct: 122 ALEKVGLSHKLHQQYERLSGGEKQRALIARAIVQQPLLLILDEPTNHLDVRYQIQILELV 181

Query: 180 EKISKEMNKTVLLSLHDPNLAFLFCDNLFLMKNGKILSEIADKNSVCPENFQELYGI 236
               + +  +V+ S+HD NLA   CD+L L+ NG++ +       +  E   +++G+
Sbjct: 182 ----RSLGISVIASIHDLNLASALCDSLLLLDNGQVSAMGTPTEVLTEERIAQVFGV 234