Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 336 a.a., ABC transporter (iron.B12.siderophore.hemin) , permease component from Pseudomonas fluorescens FW300-N2E2

 Score =  148 bits (374), Expect = 2e-40
 Identities = 92/285 (32%), Positives = 156/285 (54%), Gaps = 17/285 (5%)

Query: 39  NIFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVTSGSAFGASIAILFFA 98
           +I + IR+PR +  +L GA LAL G   Q + +N LA P++LGVTSG+  GA I +L   
Sbjct: 59  HIVWLIRVPRLLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVL--- 115

Query: 99  YNPYLVQFSAFIFGVIAVYIAYKLSSLLKSGIVG---------LILSGMAISAFFSAMIG 149
              ++ +    +   +A +I   LS LL   I           L+L G+A+S    A   
Sbjct: 116 ---HVGEIVGLLTLPLAAFIGALLSMLLVLTIAARQGRLESDRLLLCGVAVSFVMMAAAN 172

Query: 150 LIKYVADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLVMLKWVFNILATGDE 209
           L+ ++ D +     ++FW+LG     RW  L +    +++G++ L+ +    N L  G++
Sbjct: 173 LLLFLGD-HRASSAVMFWMLGGLGLARWELLAVPAASVVLGLVLLLGMARPLNALMAGEQ 231

Query: 210 NAKSLGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIARLLVGVDNRKLVPAS 269
            A +LG+++ K++     +A+L      S++G I +VG++ PHIAR LVG ++R+L+PA 
Sbjct: 232 TAVTLGLNAAKVRLWIFLIASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPAC 291

Query: 270 AFVGATLLLLCDTLARTL-TPSEIPISIITSFIGAPILIIILSKR 313
             +G+  L+  D  ARTL  P ++PI + T+ IG    I ++ +R
Sbjct: 292 VLLGSLFLVWVDVAARTLIAPEDLPIGVATAAIGGLFFIGLMRRR 336