Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (410), Expect = 1e-44
 Identities = 101/310 (32%), Positives = 173/310 (55%), Gaps = 6/310 (1%)

Query: 4   NYVFPFLFAGVFLFSLFVGRYMFDPSLIFTNSLANNIFFDIRLPRAIAVSLAGASLALAG 63
           +Y+   LF  V +  L VG     P   ++ SL   + +++RLPR +A ++ GASLA+AG
Sbjct: 22  SYLLIGLFLSVCVLYLLVGELWLSPFSAWS-SLEQQLVWELRLPRLLAAAVIGASLAVAG 80

Query: 64  VSFQNIFKNYLAGPNILGVTSGSAFGASIAILFFAY--NPYLVQFSAFIFGVIAVYIAYK 121
            + Q +  N LA P ++GV+ G++    I +LFF    +P     +A +  ++   +   
Sbjct: 81  ATLQVLLGNVLAEPGVVGVSGGASVAMVILLLFFPSLNSPVAFMAAAVLGALLFTLLLVV 140

Query: 122 LSSLLKSGIVGLILSGMAISAFFSAMIGLIKYVADPYEKLPTIVFWLLGSFVGLRWVDLG 181
           ++  L+     L+L G+A+     A++    Y +D    L  +++WL+GS  G+ W    
Sbjct: 141 MARKLRLTTARLLLVGVALGILSGAVVTWAFYFSDDLG-LRQLMYWLMGSVAGVSWYQHL 199

Query: 182 ISVIPMLIGIIGLVMLKWVFNILATGDENAKSLGVDSKKLKNITIFLATLAASASTSLAG 241
           +S++ + + +I LV+   V + L  G+ +AK LG+D  +++   I    L   AS +L G
Sbjct: 200 LSLVAVPV-VIWLVLQGGVLDKLMLGEGHAKQLGIDIHRVRWRLILAIALLVGASVALGG 258

Query: 242 MIQWVGVVSPHIARLLVGVDNRKLVPASAFVGATLLLLCDTLAR-TLTPSEIPISIITSF 300
           +I +VG+V PH+ RL +G +NR L+P SA  GA LL+  D +AR  L   E+P+ ++T+ 
Sbjct: 259 VIGFVGLVVPHLLRLTLGSENRLLLPLSALCGALLLVSADLIARLALGSGELPLGVVTTT 318

Query: 301 IGAPILIIIL 310
           +GAPI I +L
Sbjct: 319 LGAPIFIWML 328