Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 340 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  166 bits (419), Expect = 1e-45
 Identities = 101/299 (33%), Positives = 168/299 (56%), Gaps = 13/299 (4%)

Query: 19  LFVGRYMFDPSLIFTNSLANNIFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPN 78
           L+   Y+ DP       +   I ++ RL RAI  +  GA LA+ GV  Q++ +N LA P 
Sbjct: 45  LWAASYVLDP-------IDEGIVWNYRLTRAIVAAACGAGLAICGVVLQSLLRNPLADPY 97

Query: 79  ILGVTSGSAFGAS-IAILFFAYNPYLVQFSAFIFGVIAVYIAYKLSSLLKSGIVG---LI 134
           +LG+++G++ GA  +AIL F      +   AF+ G +A +    L +    G      +I
Sbjct: 98  LLGISAGASTGAVLVAILGFGAGAISMSAGAFV-GAVAAFSLVALLAHSSRGTTAAGQII 156

Query: 135 LSGMAISAFFSAMIGLIKYVADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGL 194
           L+G+A S  F+A+   +   +   E+   I+FWLLG+  G+RW  + ++V  +L+G++  
Sbjct: 157 LAGIAGSQLFNALTSFLITKSASSEQARGIMFWLLGNLSGVRWHSVWLAVPTVLVGLLVC 216

Query: 195 VMLKWVFNILATGDENAKSLGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIA 254
           +  +   +    G ++A SLG+  ++++ I I  A L  +   S+ G I +VG+V PH  
Sbjct: 217 LWHRRALDAFTFGSDSAASLGIAVRRVQIILITTAALVTAVMVSIVGSIGFVGLVIPHAV 276

Query: 255 RLLVGVDNRKLVPASAFVGATLLLLCDTLARTLTPSE-IPISIITSFIGAPILIIILSK 312
           R+LVGV + +LVP SA  GA  L+  D L+RTL   + +PI +IT+ IGAP+  +IL++
Sbjct: 277 RMLVGVRHARLVPLSALSGALFLIAADILSRTLIKGQALPIGVITALIGAPVFALILTR 335