Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 358 a.a., transport system permease protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  194 bits (492), Expect = 3e-54
 Identities = 109/280 (38%), Positives = 171/280 (61%), Gaps = 14/280 (5%)

Query: 44  IRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVTSGSAFGASIAILFFAYNPYL 103
           IRLPR +   L GA+LA +G +FQ +F+N L  P++LG  +G+   A+  +L     P  
Sbjct: 82  IRLPRILGALLVGAALATSGATFQGLFRNPLVSPDLLGAAAGAGCAAAAGLLLGLGGP-A 140

Query: 104 VQFSAFIFGVIAVYIAYKLSSLLKSGIVG-------LILSGMAISAFFSAMIGLIKYVAD 156
           +Q  AF+ G+ AV     L+ L+  G  G       ++L+G+ +   FSA IGLIK +AD
Sbjct: 141 IQGLAFLGGLAAV----GLTCLIAKGRGGAGDGPLMMVLTGLIVGTVFSAFIGLIKTLAD 196

Query: 157 PYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLVMLKWVFNILATGDENAKSLGV 216
           P   LP I FWL+GS   +   D+ ++  P+  G+    +L+W  N LA GD+ A++LG+
Sbjct: 197 PDNTLPAITFWLMGSLSAITLDDIALAAPPIGCGVGLACLLRWRLNALAFGDDEARALGI 256

Query: 217 DSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIARLLVGVDNRKLVPASAFVGATL 276
           D  +++   I  ATL  +A+ ++AG+I  VG+V PH+ R+L+G ++  L+PA A +G   
Sbjct: 257 DVGRVRLAAIVAATLMTAAAVAIAGIIGLVGLVVPHMTRMLLGPNHAVLLPACALLGGAF 316

Query: 277 LLLCDTLARTLTPSEIPISIITSFIGAPILIIIL--SKRG 314
           LL  D LAR+L P+EIP+ I+T+ IGAP+ + +L  ++RG
Sbjct: 317 LLGVDDLARSLGPTEIPLGILTALIGAPLFLALLPGARRG 356