Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 342 a.a., transport system permease protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  162 bits (409), Expect = 1e-44
 Identities = 93/292 (31%), Positives = 165/292 (56%), Gaps = 9/292 (3%)

Query: 24  YMFDPSLIFTNSLANNIFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVT 83
           Y  DP       +   I ++ R+ RA+  +  GASLA++GV  Q++  N LA P ILG++
Sbjct: 54  YALDP-------IDEGIIWNYRVARALVAASCGASLAVSGVVLQSLLLNALADPYILGIS 106

Query: 84  SGSAFGA-SIAILFFAYNPYLVQFSAFIFGVIAVYIAYKLSSLLKSGIVGLILSGMAISA 142
           +G++ GA ++A+L        +   AF+  V+A  +   ++     G   +IL+G+A S 
Sbjct: 107 AGASSGAVAVAVLGLGGGLVSLSVGAFLGAVLAFALVSFIALKAGRGPAAIILAGIAGSQ 166

Query: 143 FFSAMIGLIKYVADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLVMLKWVFN 202
            F+A+   +       ++   I+FWLLG+  G+RW D+ ++V   L G++  +      +
Sbjct: 167 LFNALTSFVVTKVATADQARGIMFWLLGNLSGVRWPDVSLAVPVALGGLVICLFYARALD 226

Query: 203 ILATGDENAKSLGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIARLLVGVDN 262
             A G ++A SLG+  +++  + I +A    +   S+ G I +VG+V PH+ARL VGV +
Sbjct: 227 AFAFGADSAASLGIPVRRVYIMMIAIAAGTTATMVSIVGSIGFVGLVIPHVARLTVGVRH 286

Query: 263 RKLVPASAFVGATLLLLCDTLARTLTPSEI-PISIITSFIGAPILIIILSKR 313
            K++PA+A +GA  ++  D L+R + P ++ PI ++T+ +GAP   +IL +R
Sbjct: 287 NKVLPAAALIGAIFMIAADILSRKIIPGQVLPIGVMTALVGAPAFALILMRR 338