Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 347 a.a., transport system permease protein (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (344), Expect = 5e-37
 Identities = 91/278 (32%), Positives = 149/278 (53%), Gaps = 10/278 (3%)

Query: 40  IFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVTSGSAFGASIAILFF-- 97
           I  ++RLPR +   +AG  LALAG   Q + +N LA P + G++SG++ GA + I     
Sbjct: 67  ILIELRLPRILLAFIAGFGLALAGAVLQTVTRNPLADPYLFGISSGASLGAVVVITLLGG 126

Query: 98  ---AYNPYLVQFSAFIFGVIAVYIAYKLSSL-LKSGIVGLILSGMAISAFFSAMIGLIKY 153
              A     +   AFI   +AV +   L    L + I  ++LSG+AIS  F A+  L+ Y
Sbjct: 127 VGGALASVGLPLGAFIGASLAVLMVLALCGRDLNTQIERMLLSGVAISFLFGALASLMLY 186

Query: 154 VADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLVMLKWVFNILATGDENAKS 213
            + P +   +++FW LGSF    W  L +  + +L     L++LK     +  GDE A +
Sbjct: 187 FSGP-QSAASVLFWSLGSFAKASWQMLWLPWLLVLAASAILLLLKRQILAIQAGDETAHT 245

Query: 214 LGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIARLLVGVDNRKLVPASAFVG 273
           LG+  ++L+ +++ L +L  +   +  G I +VG++ PH+ RLL  +  R  +  +A VG
Sbjct: 246 LGIRVQRLRLVSLLLCSLITAVLVANCGGIGFVGLMVPHMVRLL--LPGRFALLLTALVG 303

Query: 274 ATLLLLCDTLAR-TLTPSEIPISIITSFIGAPILIIIL 310
              ++  D LAR  L+  E+P+ IIT+ IG+   + IL
Sbjct: 304 GLFMIWVDVLARCLLSYQELPVGIITAVIGSLFFLFIL 341