Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis JJ

 Score =  186 bits (473), Expect = 5e-52
 Identities = 110/321 (34%), Positives = 180/321 (56%), Gaps = 26/321 (8%)

Query: 14  VFLFSLFVGRYMFDPSLIFTNSL------ANNIFFDIRLPRAIAVSLAGASLALAGVSFQ 67
           + +++L  G +    S I  + L      +N + ++IRLPR  A  L G  L+++G   Q
Sbjct: 29  ISIYALCTGDFQLSISQIINSLLGSGDASSNLVIWNIRLPRIFAAILCGIGLSVSGAVMQ 88

Query: 68  NIFKNYLAGPNILGVTSGSAFGASIAILFFAY------------NPYLVQFSAFI---FG 112
            + +N LA P  +G++ G+ FGA +AI+                NPY +   AF+    G
Sbjct: 89  CVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAESTGHIAINNPYSITIFAFLGSLLG 148

Query: 113 VIAVYIAYKLSSLLKSGIVGLILSGMAISAFFSAMIGLIKYVADPYEKLPTIVFWLLGSF 172
           V AV +  KL  L    +V   L+G+AIS+ F+A   LI+Y AD  + L  +V+W  G  
Sbjct: 149 VCAVLVLAKLKGLSPEAMV---LAGVAISSLFTAATTLIQYFADDMQ-LAAMVYWSFGDL 204

Query: 173 VGLRWVDLGISVIPMLIGIIGLVMLKWVFNILATGDENAKSLGVDSKKLKNITIFLATLA 232
               W ++ I  +   + +I  +  +W +N L +G+E AKSLGV++ K++   + +A+L 
Sbjct: 205 GRPLWPEVKIMALVAFVSLIYFIHKRWDYNALESGEETAKSLGVNTDKIRLSGMLVASLV 264

Query: 233 ASASTSLAGMIQWVGVVSPHIARLLVGVDNRKLVPASAFVGATLLLLCDTLART-LTPSE 291
            S   +  G+I +VG++ PHI R+ VG D R L+P  +  GA L+LL DT+ART ++P  
Sbjct: 265 TSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIFGAVLVLLADTIARTIISPII 324

Query: 292 IPISIITSFIGAPILIIILSK 312
           +P+ I+TSF+GAP+ + +L+K
Sbjct: 325 LPVGILTSFLGAPMFLYLLTK 345