Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 338 a.a., hemin ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  182 bits (461), Expect = 1e-50
 Identities = 106/284 (37%), Positives = 167/284 (58%), Gaps = 18/284 (6%)

Query: 43  DIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVTSGSAFGASIAILFFA-YNP 101
           ++RLPR +     GA LA  G   Q +F+N LA P I+GV+SG+A GA+I I+ F     
Sbjct: 61  NVRLPRTLLALTVGAILAQCGAVMQGLFRNPLADPGIIGVSSGAALGAAICIVLFPDVGS 120

Query: 102 YLVQFSAFIFGVIAVYIAYKLSSL-LKSGIVGLILSGMAISAFFSAMIGLIKYVADPYEK 160
            ++   AF+ G+    I Y+L+S  L + +V L+LSG+AI+A   A IG++ Y+A+    
Sbjct: 121 LMISLGAFLCGLATTLIVYRLASNGLGTSVVLLLLSGVAIAALAGAGIGVLTYLANDMA- 179

Query: 161 LPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLVMLKWVF-------NILATGDENAKS 213
           L  +  W +GS  G +W  +G+ ++        LV+L W F       N L  G+  A+ 
Sbjct: 180 LRDLTLWQMGSIAGAQWQYVGLCLLV-------LVLLSWRFQRDAMALNALLLGEAEARH 232

Query: 214 LGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIARLLVGVDNRKLVPASAFVG 273
           LG++  +LK   I L  L    S +  G+I ++G+V PH+ R+++G D+++L+P SA +G
Sbjct: 233 LGINVDRLKLRLILLCALGVGVSVAATGIIGFIGLVVPHLVRMILGPDHKRLLPMSALLG 292

Query: 274 ATLLLLCDTLART-LTPSEIPISIITSFIGAPILIIILSKRGVK 316
           A LL L D  ART L P+E+P+S++T+ IGAP  I +L ++  K
Sbjct: 293 AALLALADIGARTFLPPAELPVSLVTALIGAPFFIFLLLQQRSK 336