Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 351 a.a., iron compound ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  152 bits (384), Expect = 1e-41
 Identities = 96/289 (33%), Positives = 159/289 (55%), Gaps = 26/289 (8%)

Query: 43  DIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVTSGSAFGASIAILF-----F 97
           DIRL R     L G  LA+AGV FQ + +N LA P  LGV+SG+A GAS+AI F      
Sbjct: 63  DIRLARVCLSLLVGGGLAMAGVVFQGVLRNPLADPFTLGVSSGAALGASVAISFGVTLPA 122

Query: 98  AYNPYLVQ-----FSAFIFGVIAVYIAYKLSSLLKSGIVG-------LILSGMAISAFFS 145
           A  P LV        A +FG  A      LS +L  G          ++L+G+ +S F +
Sbjct: 123 AVAPALVAGLGVVTPAALFGAFAA-----LSLVLLLGTAAGSFRRETVVLAGVVVSTFLA 177

Query: 146 AMIGLIKYVADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLVMLKWVFNILA 205
           A++ L+K + +  E + +IVFW++GS  G  W    + + P+++G+  +V      ++LA
Sbjct: 178 ALVSLVKALDE--ESVSSIVFWIMGSLQGRGWAHTAVLLPPLVLGLAAVVRHARDLDVLA 235

Query: 206 TGDENAKSLGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIARLLVGVDNRKL 265
            GD  A  LG+ +  ++ + +  A+   +   +++G+I +VG+V PH+ RL++G  +  L
Sbjct: 236 LGDTQASQLGMRTGYVRCVLLCGASCITAGCVAVSGVIGFVGLVVPHLLRLVLGAAHGPL 295

Query: 266 VPASAFVGATLLLLCDTLARTLTP--SEIPISIITSFIGAPILIIILSK 312
           +  + F G  LLL  D +ARTL    +E+P+ ++T+ +G P   ++L +
Sbjct: 296 LIGAWFGGGILLLWSDVVARTLLSGGAELPVGVVTALVGGPFFCLLLQR 344