Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 381 a.a., Vitamin B12 transporter, permease component (fecCD-like) (from data) from Shewanella sp. ANA-3

 Score =  149 bits (375), Expect = 1e-40
 Identities = 103/320 (32%), Positives = 167/320 (52%), Gaps = 36/320 (11%)

Query: 24  YMFDPSLIFTNSLANNIFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVT 83
           ++F      + S+   I  ++RLPR I   +AGA L+LAG   Q + +N LA P + G++
Sbjct: 64  HLFMADEAVSTSMTERIVMELRLPRIILAFVAGAGLSLAGSVLQTVTRNPLADPYLFGIS 123

Query: 84  SGSAFGASIAILFFAYNP-------------------------YLVQFSAFIFGVIAVYI 118
           SG++FGA + +  F  +                          + + F AFI   ++V I
Sbjct: 124 SGASFGAVVMLTLFTGSGLFGNAGTIANSGIFSGSGTFAGLLWFSLPFGAFIGASLSVLI 183

Query: 119 AYKLSSL-LKSGIVGLILSGMAISAFFSAMIGLIKYVADPYEKLPTIVFWLLGSFVGLRW 177
              L+ L LKS +  ++LSG+A S  FSA+  L+ Y A P +   +++FW LGSF    W
Sbjct: 184 VLALAGLGLKSQVERMLLSGVATSFMFSALTSLLLYFASP-QATASVLFWSLGSFAKASW 242

Query: 178 VDLGISVIPMLIGIIG-LVMLKWVFNILA--TGDENAKSLGVDSKKLKNITIFLATLAAS 234
               + V+P L+ ++   ++L W   I+A   GDE A +LGV+  KL+   + L +L  +
Sbjct: 243 ---SLLVLPSLVVLLSFFIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITA 299

Query: 235 ASTSLAGMIQWVGVVSPHIARLLVGVDNRKLVPASAFVGATLLLLCDTLARTLTPS-EIP 293
              +  G I +VG++ PH  RLL     R+ +  +A VG   ++  D LAR L  + E+P
Sbjct: 300 ILVATCGGIGFVGLMIPHTVRLL--FPGRQPILLTALVGGLFMVWIDVLARCLLGNQELP 357

Query: 294 ISIITSFIGAPILIIILSKR 313
           + IIT+ IG+   ++IL +R
Sbjct: 358 VGIITAAIGSFFFLLILRRR 377