Pairwise Alignments

Query, 353 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 395 a.a., Vitamin B12 ABC transporter, B12-binding component BtuF from Pseudomonas fluorescens FW300-N2E2

 Score = 58.5 bits (140), Expect = 3e-13
 Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 35/250 (14%)

Query: 36  SVTDFTGETSTINSPVERVVSNYGLIPPIIYLFGEGDKIVAGRGVMGADEFIDAVDPE-- 93
           SVTD  G    ++ PV RV+   G     +YL    D       ++G  + +   DP+  
Sbjct: 43  SVTDLLGRQVKVHLPVRRVILGEGRQ---LYLVAALDTQNPIERIVGWRKDLIQSDPDTY 99

Query: 94  ------FKTRSK-------DIKSDNVEEIKSLNPDVIFA---PSWGSQQGQY-PQLKSLG 136
                 F   +K       +  + ++E+  S  PDVI         ++  +Y  +L +L 
Sbjct: 100 GAYLRKFPEIAKIPTFGGFEDGTFDIEQAISQRPDVIILNIEAQHATEDARYIEKLDALD 159

Query: 137 IPVVFIDIET--ASNYYKTIEMMGEVFQKEAYAQELIDYYNQSTNDVLKRTASISENEKP 194
           IPVV++D       N   T+ + G++F K+A A+  ID+ NQ     ++R   + E   P
Sbjct: 160 IPVVYVDFRNNPMQNTEPTMRLFGQLFGKQARAEAFIDFRNQQ----IRRVTDVIEARHP 215

Query: 195 RVLFLVYDQRKNSYWTPGGEFYQNN----LITMAGGKTVSSD-LPTGKAQINVEQAASWN 249
                V+ +R   Y       + N      + MAGG  ++   +PT   Q+N EQ    N
Sbjct: 216 -ARPKVFIERIGGYTDDCCLSFGNENFGLFVEMAGGDNIAKGIIPTTFGQLNAEQVVVAN 274

Query: 250 P-DVIITSAH 258
           P  V++TSA+
Sbjct: 275 PAQVVVTSAN 284