Pairwise Alignments

Query, 353 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 316 a.a., Periplasmic binding protein from Pseudomonas syringae pv. syringae B728a

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 21/263 (7%)

Query: 46  TINSPVERVVSNYGLIPPIIYLFGEGDKIVAGRGVMGADEFIDAVDPEF-KTRSKDIKSD 104
           T  +  +R VSN   +  ++   G    +V   G+ G ++   A+  +  K      K  
Sbjct: 35  TFTAAPQRAVSNDVNLTKMMVALGLQSHMVGYSGITGWNKPDQALLRDLGKLPELSSKYP 94

Query: 105 NVEEIKSLNPDVIFAP-SWGSQQGQ--YPQ-LKSLGIPVVFIDIE----------TASNY 150
           ++E + + N D  FA  ++G + G    PQ L  LGI    +             T  + 
Sbjct: 95  SLETLLNANADFYFAGWNYGMRVGGDVTPQSLAPLGIQAYELTESCAQIMPRAEATLEDV 154

Query: 151 YKTIEMMGEVFQKEAYAQELIDYYNQSTNDVLKRTASISENEKPRVLFLVYDQRKNSYWT 210
           Y  +  +G +F  +  A+ L+    +S +DV     S++    P+V   +YD  ++   T
Sbjct: 155 YNDLLNLGRIFDVQTRAETLVAQMRRSVSDVEN---SVAGKSPPKVF--LYDSGEDRPMT 209

Query: 211 PGGEFYQNNLITMAGGKTVSSDLPTGKAQINVEQAASWNPDVIITSAHTMEYPSTKVKED 270
            G       LI+ AGG+ V  D+      +N E     NP+VI+   +  E  + + +  
Sbjct: 210 AGRLAIPQALISAAGGRNVMGDVAASWTHVNWESVVQSNPEVIVIVDYG-EVSAAQKQHF 268

Query: 271 VLTDEGWKEINAVKSGNVYAMPF 293
           + ++     ++A+++     +P+
Sbjct: 269 LESNPALHSVDAIRNRRYVVLPY 291