Pairwise Alignments

Query, 353 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 354 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score = 47.0 bits (110), Expect = 8e-10
 Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 33/251 (13%)

Query: 105 NVEEIKSLNPDVIFA-----PSWGSQ----QGQYPQLKSLGIPVVFIDIETASNYYKTIE 155
           N+E + SL PD+I       PS+ S     QGQ       GI    ID        +T  
Sbjct: 111 NLEALASLRPDLILDVGSLDPSYRSVAERVQGQ------TGIAYALID-GGLDRVSQTYA 163

Query: 156 MMGEVFQKEAYAQELIDYYNQSTNDVLKRTASISENEKPRVLFLVYDQRKNSYWTPGGEF 215
            +G++  +   A EL  + N    ++ +R  + ++      + + Y +      +     
Sbjct: 164 RLGDLLGRPQRAAELAAWANAERAEITRRLPTPADRP---AIAVYYGRGAKGMESAASGA 220

Query: 216 YQNNLITMAGGKTVSSDLPTGKAQINVEQAASWNPDVIITSAHTMEYPSTKVKEDVLTDE 275
               +I + G + V +    G   I+ E      P+VI+ +  +          D L  E
Sbjct: 221 ITTEVIDLLGARNVVAAGGRGLVTISPESLVVARPEVILATDQSFL--------DALRGE 272

Query: 276 G-WKEINAVKSGNVY---AMPFDGESWDTLGSKYVLGLYWTAKTLHPDMYTDVDILNLTS 331
             W+ + AV++G +Y   A+PF    +    ++ +LGL W AK L+P+ + +  +  +  
Sbjct: 273 PRWQSLPAVRAGRLYKVPALPFGWVDYPPAINR-LLGLRWLAKLLYPEAFPE-PLAPVVR 330

Query: 332 SEYERFFNVSI 342
             + RF+ V++
Sbjct: 331 DFFARFYQVTL 341