Pairwise Alignments

Query, 353 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 585 a.a., radical SAM protein from Methanococcus maripaludis JJ

 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 16/205 (7%)

Query: 144 IETASNYYKTIEMMGEVFQKEAYAQELIDYYNQSTNDVLKRTASISENEKPRVLFLVYDQ 203
           I+   ++ + I+ +     +E    ELI +  +  + + K +  I           VY  
Sbjct: 379 IQQIDSWLELIKDLAMRTGREKEGNELIAFIQERVDKINKGSKLIKSYPT------VYYS 432

Query: 204 RKNSYWTPGGEFYQNNLITMAGGKTVSSDLPT-GKAQIN--VEQAASWNPDVIITSAHTM 260
                +    E ++ NL+  AGG  V+  L   GK  +N  V +    +P+++  S    
Sbjct: 433 MGYPLFALNAERFETNLVEAAGGICVNKSLTRKGKPGVNISVNEINKLSPEMMFISGFLS 492

Query: 261 EYPSTKVKEDVLTDEGWKEINAVKSGNVYAMPFDGESWDTLGSKYVLGLYWTAKTLHPDM 320
              S  V+      +   +  AV+ GN+  +P     WD    +++LG  + A T+HP++
Sbjct: 493 SPASDYVQ---YCKKHGIDNKAVRMGNICNVP---TGWDFGSPRWILGFMFLANTIHPEI 546

Query: 321 YTDVDILNLTSSEYERFFNVSIDEV 345
           Y+  D+ N     Y+RF+ + ++ V
Sbjct: 547 YS-FDLENEQKEFYKRFYGIDVENV 570