Pairwise Alignments

Query, 353 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 423 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 21/232 (9%)

Query: 107 EEIKSLNPDVIFAPSWGSQQGQYPQLKS-LGIPVVFIDIETASNYYKTIEMMGEV--FQK 163
           ++I  LNPDV+F  SW        +L++ LGI V          Y   IE    V  F  
Sbjct: 190 DKIAILNPDVVFLGSWDDHDVAENKLETELGIDVARFYTYDEKTYLGRIEWAKFVAAFWG 249

Query: 164 EAYAQELIDYYNQSTN--DVLKRTASISENEKPRVLFLVYDQRKNSYWTPGGEFYQNNLI 221
           ++ +  +  Y+  + +  + L RTAS +++    V  +  D    +Y+  G + Y N +I
Sbjct: 250 DSNSDAIEQYFQDAWHKRNELIRTASTADDYPTVVYVMPVDYGGLTYYLYGSQNYNNKMI 309

Query: 222 TMAGGKTVSSDLPTGK-----AQINVEQAASWNPDVIITSAHTMEYPSTKVKEDVLT-DE 275
           T  GG+ + +D+P        A+   E+AAS   DV+I     MEY   + ++D+L  D 
Sbjct: 310 TEFGGENIFNDIPGSSSLIIDAETFYERAAS--ADVVIYMG--MEYYGIESRDDLLQYDP 365

Query: 276 GWKEINAVKSGNVYAMPFDGESWDTL--GSKYVLGLYWTAKTLHPDMYTDVD 325
                 ++ +G +Y +P      D     + Y+      A+ +HP++Y+  D
Sbjct: 366 NLASFESLSNGKLY-IPVTSYYLDEAKDPANYMEDF---ARMIHPELYSGGD 413