Pairwise Alignments

Query, 353 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 304 a.a., iron compound ABC transporter, periplasmic iron compount-binding protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 60.8 bits (146), Expect = 4e-14
 Identities = 74/298 (24%), Positives = 118/298 (39%), Gaps = 31/298 (10%)

Query: 35  VSVTDFTGETSTINSPVERVVSNYGLIPPIIYLFGEGDKIVAGRGVMGADEFIDAVD--P 92
           VS TD TG   T+ +P  R+++ YG    I+   G+  +IVA      ADE I A+   P
Sbjct: 12  VSCTDDTGTVITLEAPARRIIALYGAFNEILVEMGQSGRIVAR---TDADEAIPALAGLP 68

Query: 93  EFKTRSKDIKSDNVEEIKSLNPDVIFAPSWGSQQG-QYPQLKSLGIPVVFIDIETASNYY 151
              T  +     N E +  L PD+I       +       L++LGIPV    + +  + +
Sbjct: 69  AIGTHMR----PNPELVAGLAPDLILQMEGRREAATSVDALRALGIPVAVFRVASFGDLF 124

Query: 152 KTIEMMGEVFQKEAYAQELIDYYNQSTNDVLKRTASISEN-----------EKPRVLFLV 200
             +  MG +   E  A  L   +    + V    A    +             PRV+F V
Sbjct: 125 SVLHRMGTLTGAEQDAAALEARWTARLDTVAGAIARQPHDTGTADGKDHTQHPPRVVFEV 184

Query: 201 YDQRKNSYWTPGGEFYQNNLITMAGGKTVSSDLPTGKAQINVEQAASWNPDVIITSAHTM 260
              R  +    G +   N++IT AGG       P    ++N E+     PD  +     M
Sbjct: 185 ---RYPNLLAAGADSIVNDIITRAGGVNAVQQ-PGRVVRLNEEELLRMAPDAYVYQYGPM 240

Query: 261 EYPSTKVKEDVLTDEGWKEINAVKSGNVYAMPFDGESWDTLGSKYVLGLYWTAKTLHP 318
               T V  D      +  ++A++ G V  +  D  ++   G + V  +   A+ LHP
Sbjct: 241 N--PTPVAPD--QRPHFTALDAIRDGRV--LKVDEHAFSRPGPRSVEAVEQLARFLHP 292