Pairwise Alignments

Query, 320 a.a., calcium/sodium antiporter from Methanococcus maripaludis S2

Subject, 356 a.a., conjugal transfer protein TraR from Pseudomonas fluorescens FW300-N2E3

 Score =  125 bits (315), Expect = 1e-33
 Identities = 87/319 (27%), Positives = 161/319 (50%), Gaps = 20/319 (6%)

Query: 10  IFGG-ILLAYGSDWFIEGSTRVAKHFNVSNFVIGATIVAFGTSLPEIVTSSGAALSGYPG 68
           +FGG +LL  G++  +  + R+A    V   +IG ++VA G+S P++  S  A L     
Sbjct: 4   LFGGLVLLIAGAELLVRAAVRLAARLKVRPLIIGLSVVALGSSAPQMAISLQATLMQNTD 63

Query: 69  LAVGNAVGSCIANIGIILGISVLMYPLIIKKRAIIKNGNIYLIATILLVILGYN-GFSRF 127
           +AVG+ +GS I NI + LG+S L+ PL + ++ +  +  + + A++L+  L +N   +  
Sbjct: 64  IAVGSVIGSNIFNILVTLGLSALIIPLRVSRQLVRLDIPVMIGASLLVFALAWNERLTPL 123

Query: 128 DGLILFLFMITYVIYTIKTSESDDEEIISDLTTKKAS--------IFIVVGLLAVILGSD 179
           DG IL   ++ Y+   +  S        +   +  AS        + ++ GL  ++    
Sbjct: 124 DGTILLAALVLYLGLLLHQSRHSVRPHTTPADSNNASGAPWLSSLLLMLTGLALLVFAGH 183

Query: 180 LFIEGAKGIAEYFNVPESIIGFSLVAFGTSLPELASSVAAAKRKLGSIVLGNVIGSNIAN 239
           L +  A  +A    + E IIG +++A  TSLPELA+S+ AA R    I +GNVIGSN+ N
Sbjct: 184 LLLSAAVEVATDLGLSERIIGLTIIAVSTSLPELATSLIAALRGQRDIAVGNVIGSNLFN 243

Query: 240 TCIALSFSAMIVDIPKYNVELMVNTIMALLIIFTMNREKIKKMLKFKNFRTDYFSKIDRI 299
               L  +A++   P       ++  + +L+  +        +L    F + Y  +I R 
Sbjct: 244 LLGVLGVTALVAPTPLSVSPNALDFDLPVLLAVS--------VLCLPMFYSGY--RITRA 293

Query: 300 DGISYILIYLIFLAYLLGY 318
           +G+ ++ +YL +  +++ +
Sbjct: 294 EGLLFLALYLAYGLHVVSF 312



 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 4/140 (2%)

Query: 9   MIFGGILLAYGSDWFIEGSTRVAKHFNVSNFVIGATIVAFGTSLPEIVTSSGAALSGYPG 68
           M+ G  LL +     +  +  VA    +S  +IG TI+A  TSLPE+ TS  AAL G   
Sbjct: 171 MLTGLALLVFAGHLLLSAAVEVATDLGLSERIIGLTIIAVSTSLPELATSLIAALRGQRD 230

Query: 69  LAVGNAVGSCIANIGIILGISVLM--YPLIIKKRAIIKNGNIYLIATILLVILGYNGF-- 124
           +AVGN +GS + N+  +LG++ L+   PL +   A+  +  + L  ++L + + Y+G+  
Sbjct: 231 IAVGNVIGSNLFNLLGVLGVTALVAPTPLSVSPNALDFDLPVLLAVSVLCLPMFYSGYRI 290

Query: 125 SRFDGLILFLFMITYVIYTI 144
           +R +GL+     + Y ++ +
Sbjct: 291 TRAEGLLFLALYLAYGLHVV 310